Pseudomonas tritici: HU722_0000255
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Entry
HU722_0000255 CDS
T07594
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
ptrt
Pseudomonas tritici
Pathway
ptrt02025
Biofilm formation - Pseudomonas aeruginosa
ptrt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ptrt00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU722_0000255 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU722_0000255 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptrt02044
]
HU722_0000255 (tssM)
Secretion system [BR:
ptrt02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU722_0000255 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
Motif
Other DBs
NCBI-ProteinID:
QXH83954
UniProt:
A0A8H9YZA7
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Position
complement(51878..55378)
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AA seq
1166 aa
AA seq
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MKAFFSFMIRWVIPVLGLIALSLIIWFVGPLLDVLVPEGRRWALIILVFALWIAYRVFRI
IQARRQAAEVMRSLAAETPADPNSVATAEELTTLRQRMDEALTLLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSNSTVDKAAWLGFLDLLKKQRSRRPIDGAFIAISLSDLLLGTDAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKEDRAQVWGMTFALDDGKNSDSP
LAHLQSEFSGLEQRLNERLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQSGTGRSYFIEKLFTAV
AFAERGLVGVNPKVERRRKWIARGVLAATVALVVVVSSLWWVSYRANQAYIAQVDQKVAP
LGQTVQNLSPAQREVLAVLPLLNAVKNLAGDSPSWSEGLGLYQGDMLEAESASVYRKLLI
AVFAPRLVTRIEEQLHGGGNSDFLYEGLKAYLMLADTEHYDPDFIKAWIALDWDRNLPRD
LPADQRQALAGHLQALFERHPPSARLDPRLIDDLRRQLQQLPVAQRVYDRVKRQKLPEGI
PDFRINEAAGRDAALVFSRKSGKPLGEPLSGFFTAKGYRQAFLLSSLNQTGTLAEEQWVL
GHEQADQQNVVSLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQAEERQLAAKGVPVEGGVDKLKERLGSLLGQEQPTSNAPQAADDPV
TAHFAELNSIVSKGEGEPAAIDGLLTDMNALYVQVSAMVGASGDALLGEAKNQAAAAATR
VSLNAERQPPLVQGMVKSVVNSTTNSMMGGVRNQLNAAWVSEVVNVYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSAQTWRWQPGAAQKLGIAPGVLQTFQ
RAATIRDAFFRSGGTQPVVRFELKPVSMDPTITQFLLDLDGQQLSYDHGPSRPVAMQWPN
PGSIGVVRISIMPPSASGRSGVTLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASIA
YELRANSAFNPFKSRVLSGFSLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagttttatgattcgctgggtgatccccgtgctgggcctgatcgcc
ctgagtttgatcatctggtttgtcgggccgttgctcgacgtgctggtgccggaagggcgc
cgttgggcgctgatcatcctggtgtttgcgctgtggattgcctaccgcgtgttccgcatc
atccaggcccgccgccaggccgccgaagtgatgcgcagcctggccgccgaaaccccggcc
gaccccaacagcgtcgccacggccgaagaactcaccaccttgcgccagcgcatggacgaa
gcgctgacgctgctgaaaaaggccaagctcggtggcgatgagcgccgcaatctttacgag
ctgccatggtacgtaatcatcggcccaccgggttcgggcaagaccaccgcgctggtcaat
tccgggctgcatttcccattggccgcgcagttgggcgcgggtgccgtgcgtggtgttggt
ggtacacgtaactgcgactggtggtttaccgaccaggccgtgttgctcgacaccgctggg
cgctacaccacccaggacagcaactccacggtggataaagccgcgtggctgggcttcctc
gacctgctgaaaaagcagcgctcgcgtcggcctatcgatggcgcttttatcgccatcagc
ctgtcggacttgctgctgggcaccgatgctgaacgtgccgcccacgccgcggccatccgc
ctgcgtatccaggagctgtacacccaactgggcgtgcgtttcccgatctacctgatgctc
accaagctcgacctggtgccgggcttcatggagttcttcgacaacctgagcaaggaagac
cgcgcccaggtgtggggcatgacctttgccctggacgatggcaagaacagtgacagcccg
ctagcgcacctgcagagcgaattctccggcctggaacagcgcctcaacgaacgcctggtc
gaacgcctgcaacaggaacgtgacccagcgcggcgcgacctgatctacggtttcccgcag
cagttcggcgcgttgaaggattgcctgcaaagcttcctcgaaggcgtgttcaagcccaat
gcgtttgaggagcgcgtgttgctgcgcggtgtgtatttcaccagtggtacccaggaaggc
agcccgattgatcgcttgatcggcgcgatggcccagagcatgaatctggaccgccagcac
ctggcacgccagagcggcaccggccgcagttacttcatcgaaaaactcttcaccgccgtg
gcgtttgccgagcgtggcctggtgggggtgaaccccaaggtcgagcggcggcgcaagtgg
attgctcgtggtgtcctcgccgccaccgttgcgttggtggtggtggtcagcagcctgtgg
tgggtgagttatcgcgccaaccaggcgtatatcgcccaggtcgaccaaaaggtcgcgccg
ctgggccagaccgtccagaacctgagcccggcgcagcgcgaagtgctcgccgtgctgccg
ttgctcaacgccgtgaagaacctggcaggcgactcgccgagctggtccgaaggcctgggg
ctgtaccaaggcgacatgctcgaagccgaatccgccagcgtctaccgcaagctgttgatc
gccgtgttcgcgccacgcctggtgacgcgtatcgaagagcaactgcacggcggcggcaat
tccgacttcctctacgaaggcctcaaggcctacctgatgctcgctgacaccgagcattac
gacccggacttcatcaaggcctggatcgccctcgactgggaccgcaacctgccgcgcgac
ctgccggctgatcagcgccaggccctggccgggcacttgcaggcgttgttcgagcgccat
ccgccaagcgcgcgcctcgacccacgtttgattgatgacctgcgccgccagttgcaacaa
ctgccggtggcccagcgcgtctacgaccgggtcaagcgccagaaactgcccgaaggcatt
ccggattttcgtatcaacgaagccgccggccgtgacgcggcgctggtgttcagccgtaaa
agcggcaagccgttgggcgagccgctgagtgggttcttcaccgccaaaggctatcgtcag
gcgttcctgctgagcagcctgaaccagaccggcacccttgccgaagagcaatgggtgctg
ggccatgaacaggccgaccagcagaacgtggtgagcctggccgccgatgtgcgccgcttg
tatttccaggactaccagcgccagtgggatgccttgctggcggacatcgactttgtgccg
atcaccagcgtggcccaggcggccgacgtattgcgggtgatatccggcccgacctcgccg
ctgaaaaaactgctggtggcggtggccaaggaaaccgacctgcaagccgaagaacgccag
ttggccgccaaaggcgtgccggtagaaggcggcgtcgacaagctcaaggagcgcctgggc
agtctgctcggccaggaacaaccgacctccaatgcaccgcaagcagcggatgatccggtg
accgcgcacttcgccgaactcaacagcatcgtcagcaagggcgaaggcgaaccggcggcc
atcgacggcctgctcacggacatgaacgcgctgtatgtgcaggtcagcgccatggtcggc
gccagcggcgatgcgttgctgggcgaggcgaagaaccaggcggcggctgcggccacgcgg
gtcagcctgaatgccgagcgccagccgccgctggtgcagggcatggtcaagtcggtggtc
aattccaccaccaacagcatgatgggcggggtgcgtaaccaactgaacgcggcgtgggtc
agtgaagtggtcaacgtgtatcgccagtccctggctgggcgttatccgatgtcgccgggc
agcgcgcgcgatgccaccttggacgacttcggccaatttttcggcgtgggcggggtgatg
gacaactacttccgcaaatacctgcagccttacgtcgacacctccgcacaaacctggcgc
tggcagccgggcgcggcgcagaaactcgggattgcaccgggcgtgctgcaaaccttccag
cgtgcagcgaccattcgtgatgcgttcttcagatcggggggcacgcagcccgtcgtgcgt
ttcgaactcaagcccgtgtcgatggacccgaccatcacccagttcctgctcgacctcgat
ggccagcaattgagctacgaccacggcccaagccgaccggttgcgatgcaatggccgaac
cccggcagcattggtgtggtgcgtatttccatcatgccgccgtcggccagtggccgctcc
ggtgtgaccctcgacgggccgtgggcgtggttccgtttgctggagcaatcggacctcacc
gccggtaattcgccggatcgtttcaacctgcgcctgcgggtcgacggcgcgagcatcgcc
tacgagttgcgcgccaacagcgccttcaacccgttcaagagccgcgtgctcagcggcttc
agcctgccggagcggctatga
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