Photorhabdus thracensis: VY86_04845
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Entry
VY86_04845 CDS
T03944
Name
(GenBank) 23S rRNA pseudouridylate synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
ptt
Photorhabdus thracensis
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptt03009
]
VY86_04845
03016 Transfer RNA biogenesis [BR:
ptt03016
]
VY86_04845
Enzymes [BR:
ptt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
VY86_04845
5.4.99.29 23S rRNA pseudouridine746 synthase
VY86_04845
Ribosome biogenesis [BR:
ptt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VY86_04845
Transfer RNA biogenesis [BR:
ptt03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
VY86_04845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
RRM_7
Motif
Other DBs
NCBI-ProteinID:
AKH62765
UniProt:
A0A0F7LJG3
LinkDB
All DBs
Position
1234743..1235393
Genome browser
AA seq
216 aa
AA seq
DB search
MEAYNPPTDPWLHVLYQDQHIIVVNKPSGLLSVPGRAEEHKDSIMTRIQQQFPTAESVHR
LDMATSGVMVVALLKDAERELKRQFREREPKKTYIARIWGRLEPETGIVDLPLICDWPNR
PKQKVCFETGKSAQTEYEVLAYEDEATRVKLSPITGRSHQLRVHMLALEHPILGDRFYAH
QQARAMAPRLQLHAQELYITHPAYGTPMHFQCKADF
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggaagcttataaccctcccaccgacccctggttacatgtgctctatcaggatcaacac
atcatagtggtcaataaacccagtgggctactctctgttcctggccgggcagaagaacat
aaagacagcattatgacgcggatacagcagcagtttccgacagcggaatctgttcaccgg
ctggatatggcaaccagcggcgtaatggtggttgcattgctcaaagatgcggaacgtgaa
ttgaaacgccagttccgtgaacgggaaccgaaaaaaacctatattgcacggatttgggga
cgtctggaaccagaaaccggcattgtcgatctaccattgatttgtgactggccgaacaga
ccaaagcagaaagtttgttttgaaaccggaaaatcagctcaaactgaatacgaagtactc
gcttacgaagatgaagcaacccgggtaaaactttcaccgataacaggtcgttcacatcag
ctcagggtacacatgctggcacttgagcaccctattctgggagatcggttttacgctcat
cagcaggcaagagcaatggcacctcgcctgcaattacatgcacaggagctctatatcacc
catccagcctatgggaccccaatgcattttcagtgtaaagccgatttttaa
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