Pandoraea thiooxydans: ABW99_09865
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Entry
ABW99_09865 CDS
T03947
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
ptx
Pandoraea thiooxydans
Pathway
ptx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABW99_09865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptx03400
]
ABW99_09865
DNA repair and recombination proteins [BR:
ptx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABW99_09865
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABW99_09865
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Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AKJ68472
UniProt:
A0A0G3ET37
LinkDB
All DBs
Position
complement(2951071..2951667)
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AA seq
198 aa
AA seq
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MPALTSLQELIEALRALPGVGPRSAQRIAYHLLQHDRSAATRLGEALLHASGEVRHCARC
NTFTEVEVCETCQDPERDPSLLCVVETPADQLMVEQTLTFRGLYFVLMGRLSPLDGIGPK
EIHFEQLIRRISDGVVKEVILATNFTNEGEATAHYLAQMLKARGLKASRLARGVPVGGEL
EYVDAGTIARAVLDRHTL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcactgaccagtctccaggaattgatcgaagcgctgcgcgcactgcctggcgtc
ggcccgcgatcggcgcagcgcatcgcttaccacctgttgcagcacgaccgcagcgcggcc
acgcggctgggcgaggcattgctccatgcatccggcgaagtccggcactgtgcccgctgt
aatacgtttaccgaggtcgaagtctgcgagacctgccaggacccggagcgcgacccctcg
ctgctgtgtgtggtcgaaacgccggccgaccagttgatggtcgagcaaacgttgaccttc
cgcgggctctacttcgtcctgatggggcggctctcgccgctcgacggcatcgggcccaag
gagatccacttcgagcagttgatccggcgcatcagcgacggcgtggtcaaggaagtcatt
ctggccacgaacttcaccaacgaaggcgaggccaccgctcactacctcgcccaaatgctc
aaggcccgcggcctcaaggcgagccgcctggcgcgcggtgtgccggtcggcggcgagctg
gaatacgtcgacgccggcaccatcgcccgcgcagtgctcgaccggcatacactgtaa
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