Candidatus Pelagibacter ubique: SAR11_1155
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Entry
SAR11_1155 CDS
T00257
Symbol
prpB
Name
(GenBank) hypothetical protein prpB
KO
K03417
methylisocitrate lyase [EC:
4.1.3.30
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub00640
Propanoate metabolism
pub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SAR11_1155 (prpB)
Enzymes [BR:
pub01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.30 methylisocitrate lyase
SAR11_1155 (prpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP_mutase
ICL
Pantoate_transf
Motif
Other DBs
NCBI-ProteinID:
AAZ21958
UniProt:
Q4FLI0
LinkDB
All DBs
Position
1109959..1110855
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AA seq
298 aa
AA seq
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MHFVEKEPSQKRADFVSKLKSNKILRVPGAYNPLTAKLIEEIGYDAVYVSGGVMANDLGF
PDIGLTTLQDVSTRSYLISRVTSLPTIVDIDTGFKSCEETIKTFEEFGVSAVHLEDQVER
KRCGHLDNKELISTEAMVKKIKECVAAKQDENFKIIARSDAKGVEGIDKMIDRCKAYIDA
GAEIIFPEALQDEKDFEKVRKELSCYLLANMTEFGKSKLFNYKELENFGYNIVIYPVTTQ
RLAMKNVEDGLRDIFVNGHQNNIIDKMQTRKRLYELVEYEKYNSLDEKIYNFSTEGHE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcattttgtagaaaaagagcccagtcaaaaaagagctgactttgttagtaaactaaaa
tcaaataaaattttaagagtgccaggagcttataacccactaacagcaaaactaattgaa
gaaattgggtatgacgcagtttatgtatcaggtggagttatggctaatgatttaggtttt
ccagatataggtttaactacgcttcaagatgttagtactagatcttatttaatatctaga
gttacaagtttacctaccatcgttgatatcgacactggctttaagtcttgtgaagaaact
attaaaacttttgaagaatttggggtgtcagcagttcacttagaagatcaagtagaacga
aaaagatgtggtcacttagataacaaagaattaatttcaactgaagcaatggttaagaaa
attaaagaatgtgtagccgcaaaacaagatgaaaattttaaaattatagcaagatctgat
gctaaaggagttgagggaatagataagatgattgatagatgtaaggcatatattgatgct
ggagctgaaattattttcccagaagctttacaggatgaaaaagattttgaaaaagttaga
aaagaattatcatgttacttactggctaatatgacagaatttggaaaatctaagttattc
aattacaaagagttagaaaattttgggtataatattgtgatttatccagtaaccacacaa
agattggctatgaaaaatgtagaagatggtcttagagacatttttgtgaatggacatcag
aacaacattattgataaaatgcaaactagaaaaagactttacgagttagtagaatatgaa
aagtacaattcgttagatgaaaaaatttataactttagtacggaaggacatgaataa
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