Panthera uncia (snow leopard): 125913252
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Entry
125913252 CDS
T08832
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04512
ECM-receptor interaction
puc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125913252
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125913252
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
puc00535
]
125913252
Proteoglycans [BR:
puc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
125913252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
Laminin_EGF
CFAI_KAZAL
SEA
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
125913252
NCBI-ProteinID:
XP_049474296
LinkDB
All DBs
Position
C1
Genome browser
AA seq
2017 aa
AA seq
DB search
MASLRPPGPALLQPLLLLLVVAARALPRADGTCPERALERREEEANVVLTGTVEEILNVD
PVQHTYSCKVRVWRYLKGKHMVTQESLLDGGNKVVIGGFGDPLICDNQVSTGDTRIFFVN
PAPPYLWPAHKNELMLNSSLMRITLRNLEEVEHCVEDKPGTHFTPAPPVPPDACRGMLCG
FGAVCEPSAEGSGRASCVCKKSACPAVVAPVCGSDASTYSNECELQRAQCSQQRRIRLLS
RGPCGSRDPCSNVTCSFGSTCARSADGQTATCLCPATCRGPPDGPVCGSDGADYPSECQL
LRHACARQENIFKKFDGPCDPCQSARSDLSRICRVNPRTRRPEMLLRPESCPPRQAPVCG
DDGVTYDNDCTMGRTGAARGLLLQKVRSGQCQPQDQCPDVCRFNAVCLIRRGRPRCSCDR
VICDGAYRPVCAHDGHTYDSDCWRQQAECQQQRAIPAKHQGPCDQPLSPCLGVQCPFGAA
CAVKNGEAECVCQQACSGIYDPVCGSDGVTYGSTCELEATACTLGREIRVARRGPCDRCG
QCRFGALCEAETGRCVCPSECVALAQPVCGSDGHTYASECELHVHACTHQISLRVVSAGR
CQTCGDTVCAFGAVCSAGRCVCPRCERPPPGPVCGSDGVTYHSACELREAACQQQTRIEE
ARAGPCEQAECGSGGSGSGEDGECERELCRQHGGVWDEDSEDGPCVCDFSCQSAPRSPVC
GSDGVTYGTECELKKARCELQRELYVAAQGTCRGPTLAPLPPAVPPHCTQTPYGCCQDNI
TAARGVGLAGCPSSCHCNPHGSYSGTCDPATGQCSCRPGVGGLKCDRCEPGFWNFRGIVT
DGRSGCTPCSCDPRGAVRDDCEQMAGLCSCKPGVAGPKCGQCPDGHTLGPAGCETDSLAP
ETCAEMRCEFGASCVEEAGSAHCVCPTPTCPEASATKVCGSDGVTYGNECQLRTIACRQG
LDISIQSLGPCQDSLFLAEAIASGARPTSPAPVATLGLNVSRALPPPPSALPLTPGSTPH
SRPTPRPSPGPWTTARIPRTTTRPVLTMPPTAPATAPNLATSAFGESGSADGSGDEELSG
DLEASGTGSGGLEPPEGGSAVTPGPPLERASCYNSPLGCCSDGKTPSLDTEGSNCPATKA
FQGVLELEGVEGQELFYTPEMADPKSELFGETARSIESTLDDLFRNSDVKKDFRSVRLRD
LGPGSSVRAIVDVHFDPATTFRAPDVGQALLRQIQASRRRSLGVRRPLQEHVRFMDFDWF
PAFFTGATTGATPAAATARATTVAHLPSAVTQRALYPSHTSRPVGRTTALPTTRQLPTTA
PRHVPGRRPLPPGTQQPPRPCDSQPCLHGGTCQDQDSGGGFTCSCPVGRRGDTCEKALQP
SLPAFGGHSFLAFPTLRAYHTLRLALEFRTWEPQGLLLYNGNARGKDFLSLTLLGGRVQL
RFDTGSGPAVLTSSVPVEPGRWHRLELSRHWRRGTLSVDGETPVVGHSPSGTDGLNLDTD
LFVGGVPADQASVVLERTSVSVGLKGCIRLLDINNQRLELSSWQGTVTRSSGVGATCSDG
ENPCEPNPCHGAAPCRVLPGGEAQCECPQGRGGALCQTVSKQDYPRPFLADFSGFSYLEL
EGLHTFARDLGEKMALDVVFLARGPSGLLLYNGQKTDGKGDFVSLALHDRFLEFRYDLGK
GAAVIRSKEPVALDTWTRVSLERSGRKGAMRVSDGPRVLGESPVPHTVLNLKEPLYVGGA
PDFSKLARAAAVSSGFDGVIQLVSLKGHQLLTQEHVLRAVDVSSFTHHPCTQASGHPCLN
GASCLPREASYECLCPGGFSGLHCEKGLIEKSAGDLDALAFDGQTYVEYLNAVTESEKAV
RSNHFELSLRTEATQGLVLWSGKATERADYVALAIVDGRLQLTYDLGSQPVVLRSTVPVN
TNRWLRVRAHREQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLEKPPMGQALPKA
YSTGFVGCLRDVVVGQRPLHLLEDAVTKPGLRACAAP
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atggccagcctgcggccgcccggcccagccctgctgcagccactgctgctgctcctggtc
gtggccgcgcgcgccctgccccgcgccgacgggacgtgcccggagcgcgcgctggagcgg
cgggaggaggaggcgaacgtggtgctcaccggcaccgtggaggagattctcaacgtggac
ccggtgcagcacacgtactcgtgcaaggttcgggtctggcggtacttgaagggcaaacac
atggtgacccaagagagcctgcttgatggtggcaacaaggtggtgattggcggctttgga
gatcccctcatctgtgacaaccaggtgtccactggggacaccaggatcttctttgtgaac
cctgctcccccgtacctgtggccagcccacaagaacgagctgatgctcaattctagcctc
atgcgtatcactctgcggaatctggaggaagtggagcactgtgtagaagacaaacctggg
acccatttcacaccagcacctccagtgcctccggacgcatgccgaggaatgttgtgtggc
tttggcgccgtgtgtgagcccagcgcggaaggttccggcagagcctcctgtgtgtgcaag
aagagtgcctgtccggctgtggtggcgcctgtgtgtggctccgacgcctccacgtacagc
aacgagtgtgagctccagcgggcgcagtgcagccagcagcgacgcatccgcctcctcagc
cgcgggccctgcggctcccgggacccctgctccaatgtgacgtgcagcttcggcagcacc
tgtgcgcgctcagcagacgggcagacggccacgtgcctgtgcccggccacctgccggggg
ccccctgacggccccgtgtgtggcagcgacggggccgactaccccagcgagtgccagctc
ctgcgccatgcgtgcgcgcgccaagagaacatcttcaagaagttcgacggcccttgtgac
ccttgccagagcgcccgcagtgacctaagtcgtatctgccgtgtgaacccacgcacgcgg
cgccctgagatgctgctgcggccagagagctgccctcctcggcaggcacccgtgtgcggg
gacgacggggtcacctacgacaacgactgtacgatgggccgcacgggagctgcccgtggc
ctcctcctccagaaagtgcgctccggccagtgccagcctcaagaccagtgcccagatgtg
tgcaggttcaacgccgtgtgcctgatccgccggggtcgcccccgctgctcctgtgaccgc
gtcatctgcgacggggcctacagacctgtgtgcgcccacgacgggcacacctacgacagt
gactgctggcgccagcaggctgagtgtcaacagcagcgcgccatccctgccaagcaccag
ggcccgtgtgaccagcccctgtccccatgccttggggtgcagtgcccgtttggggcagcg
tgtgctgtgaagaacggggaagccgagtgtgtgtgccagcaggcgtgttcgggcatctat
gatcctgtgtgtggcagtgatggcgtcacgtacggcagcacgtgtgagctggaagccacg
gcctgcacccttggacgggagatccgggtggctcgcagaggaccctgtgaccgctgtggg
cagtgccgcttcggagctctgtgtgaggctgagaccgggcgctgcgtgtgcccctccgag
tgcgtggccctggcccagcctgtgtgcggctctgatgggcacacgtacgccagcgagtgt
gagctgcacgtccacgcctgcacacatcagatcagcctgcgtgtggtctcggctggacgc
tgccagacctgcggagacacggtgtgtgcctttggcgcggtgtgctcggctggacggtgt
gtgtgtccccggtgtgagcgccccccgcccggccccgtgtgtggcagtgacggtgtcacc
taccacagcgcctgtgagctccgggaggctgcctgccagcagcagacacggatcgaggag
gcccgggcagggccctgtgagcaggccgagtgcggctccggaggctctggctctggagag
gacggcgagtgtgagcgggagctgtgccggcagcatggcggcgtctgggacgaggactcg
gaagacgggccctgcgtctgtgacttcagctgccagagcgccccgaggagcccggtgtgt
ggctccgacggggtcacctacggcaccgagtgcgagctgaagaaggcccggtgtgagctg
cagcgggaactgtacgtcgcggctcagggaacctgccgtggccccaccctggccccgctg
ccacctgcagttcccccgcactgcacccagaccccctacggctgctgccaggacaacatc
actgctgcccgcggtgtgggcctggctggctgccccagctcctgccactgcaacccacat
ggctcctacagtggcacctgtgacccagccacaggccagtgctcctgccgcccaggggtc
gggggcctcaagtgtgatcgctgtgagcccggcttctggaacttccgtggcattgtcacc
gacggccggagcggctgcactccctgcagctgtgacccccggggtgctgtgcgggacgac
tgtgagcagatggcagggctgtgctcgtgtaagcctggggtggccggacccaagtgcggg
cagtgtccggacggccacaccctgggccctgctggctgtgagacagactccttggcgccc
gagacctgtgctgagatgcgctgcgagtttggggcatcctgcgtggaggaagctggctcc
gcacactgcgtgtgcccgacacccacctgtccagaggccagtgccaccaaggtctgtggg
tcggacggagtcacctacggcaatgagtgccaactgaggaccatcgcctgccgccagggc
ttggacatctctatccagagccttggcccatgccaggactctctttttcttgcagaggct
attgcttctggtgcccgcccaacatctcctgcacccgtggccaccttggggctcaacgtg
agcagggcgctgccgcccccacccagcgccctccccctgactcccggcagtacccctcac
agccggcccactcctcgaccctcaccgggaccttggaccactgcccgcatccccaggaca
accacgaggcccgtgctgaccatgccccccacggcccctgccacagcccccaatctcgcc
acatctgcctttggcgaatctggcagtgctgatgggagcggcgatgaggaactgagtggt
gacctggaagccagtgggacgggctcagggggactcgagccccccgaaggtggcagcgct
gtgacccctgggccacccctagagagggcttcttgctacaactcacctttgggctgctgc
tcggatggcaagacgccctcgctggacacagaaggttccaactgtcctgccaccaaggcg
ttccagggtgtgctggagcttgagggagtcgaggggcaagagctgttctatacaccggag
atggctgaccccaagtcagagctttttggggagaccgctaggagtatcgagagcacactg
gatgacctcttccggaactcagacgttaagaaggacttccgaagcgtccgcctgcgggac
ctggggcctggcagctcagtccgagccattgtggacgtgcactttgatcctgccacgacc
tttagggcgcccgacgtgggccaggccctgctccggcagatacaggcctctaggcgccgg
tccctgggggtcaggcggccactgcaggagcacgtgcgcttcatggactttgactggttt
cctgcgttcttcacgggagccaccacgggagccacacctgccgccgccacggccagggcc
accaccgtggcccacctgccttctgctgtgacccagcgggccctctaccccagtcacaca
agccggcctgttggcaggaccacagccctgcccacgacacgccagctccccaccactgcc
ccccgtcatgtgcctggacgccggcccttgcccccaggcacccagcagccaccaaggccc
tgtgactcccagccctgcctccacggagggacctgccaggaccaagactcaggtggaggc
ttcacctgtagctgcccagtgggcaggaggggagacacctgcgagaaggcactgcagccc
tcactgccagccttcggaggccactccttcctggccttccccaccctccgtgcctaccac
acactgcgcctggcgctcgagttccggacgtgggagccacaggggctgctgctctacaat
ggcaacgcccggggcaaggacttcctgtcactgacgttgctggggggccgcgtgcagctc
aggttcgacacaggttcggggcccgcggtactgaccagctcagtgcctgtagagcctggc
cgctggcatcgcttggagctgtctcggcactggcgccggggtaccctctcagtggatggt
gagacccctgttgtgggccacagccccagtggtacggatggtctcaacctggacacagac
ctctttgtgggcggcgtcccagcggaccaggcttccgtggtgctcgaaaggacctctgtc
agcgttggcctcaagggctgtatccgcctgctggacatcaacaatcagcggttggaactc
agcagctggcaggggacagtaacccgaagctctggtgtgggtgcaacctgtagtgatggc
gagaacccctgtgagccgaacccttgccacggggcagccccttgccgtgtgctgcctggg
ggcgaggcccagtgcgaatgcccccagggacgagggggcgccctctgtcagacagtctcc
aagcaggattatccccggcccttcctggctgacttcagcggcttctcctacctggagctg
gaaggcctgcatacgtttgcgcgagatctaggggagaagatggcgctggacgtggtgttc
ctggcccgtggccccagtggcttgctcctctacaatgggcagaagacggatggcaagggg
gactttgtgtcactggcgttgcatgatcgattcctggagttccgctatgacctgggcaag
ggggcagcggtcatcaggagcaaggagccagtggccctggacacctggaccagggtctca
ctggagcgcagtggccgcaagggcgccatgcgtgtcagtgacgggccccgagtgctgggg
gagtccccggtgccacacacagtcctcaacctgaaggagccgctctatgtcggaggggct
cctgatttcagcaagctggcccgggcagctgcagtgtcctccggctttgacggcgtcatc
cagctggtctccctgaaaggccaccagctgctgacccaggagcacgtgctgcgggcagtg
gacgtctcgtctttcacacaccacccttgtacccaggcctcgggccacccctgcctcaat
ggggcctcctgcctccctcgggaggcctcctatgagtgcctgtgtcccgggggcttctcg
gggcttcactgcgagaaggggctgattgagaagtcggcaggggatctggatgccctagcc
ttcgacggacaaacctacgttgaatatctcaatgccgtgaccgagagtgagaaggcagtg
cgcagcaaccactttgagctgagcctacgcacagaggccacacaggggctggtgctgtgg
agcgggaaggccacagagcgggctgactacgtcgctctggccatcgtggatgggcgcctg
cagctgacctacgacttgggctcccagcccgtggtgctgcgttccaccgtgccggtcaac
accaaccgctggttgcgggtcagggcacacagggaacagagggaaggatccctccaggtg
ggcaatgaggcccctgtgactggctcttccccgctgggtgccacacagctagacacagac
ggagccctgtggctgggtggcctggagaagccgcccatgggccaggccctgcccaaagcc
tacagcacaggctttgtgggctgcctccgggatgtagtggtgggccagcgcccgctgcac
ctgctggaagatgctgtcaccaagccggggcttcgggcctgtgccgccccgtga
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