Panthera uncia (snow leopard): 125926308
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Entry
125926308 CDS
T08832
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
puc
Panthera uncia (snow leopard)
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125926308
03036 Chromosome and associated proteins [BR:
puc03036
]
125926308
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125926308
Chromosome and associated proteins [BR:
puc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125926308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA
RRM_1
RRM_occluded
Rtf2
HYPK_UBA
Motif
Other DBs
NCBI-GeneID:
125926308
NCBI-ProteinID:
XP_049491555
LinkDB
All DBs
Position
E1:complement(3830891..3918202)
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AA seq
2007 aa
AA seq
DB search
MAFDTWAERTATEALVRSGQLAVAPRSGPVFSAPSWSALLPTIWFKRDFILMPSFFMLNR
EKEQETQKEERLMEEKKKKKQEEKKKKEGAQKKAADQKTKVPEPPKTCSSQPQPAGTAAS
VCTSALPSGGNGKRASASSQQPAAPRYLPREVPPRFRQQEQKQLLKRGQPLPAGALASVS
PTQGAGPAGVSPPPLPGAGAQQHPSKLQADLSHGGSADHYDSSHRGQQPTHRSEASCSWD
QVITDRTDKEAWPSITGTETESASECTTDTDSASNCGSENSSMATGSAQGAFTGHTKKTN
GNNGTNGVPVQSPSNQGALGAGGANGNGNAARVWGVAAGPGSGPAHCSLGGGDGKMDSMI
GDGRSQNCWGASNSNAGINLNLNPNANPAAWPVLGHEGTVATGNPSSICSPVSAIGQNAG
NQNGNPPGTLGAWGSLLPPESTEPQTSASQNVSFSVQPQNLNTDGPNNTNPMNSSPNPVN
AMQTNGLPNWGMAVGMGAIIPPHLQGLPGANGSSVSQVGGSGGEGLGGSVWGLSPGNPAA
GSSSSGFGQGNGDTVNSALSAKQNGSSSAAQKEGSGGNAWDSGPPAGPGLLAWGRGGGNS
SGVGHIHSGAWGHPTRSASNGVNGEWGKPPNQHSNGDGNGKGSTGWDGPSVSGQNPAVQP
GSEHVNSWAKAASSGTTASEGSSDSSGSHHEGGSGREGAEGRRRDKGILDQGHIQLPRND
LDPRVLSNTGWGQTPVKQNTAWEFEESPRSERKNDNGTEAWGCAAPQPSHSGAKSDGSIV
SSTNTSAVSGWVSSPPAAAPASTGWGDGSNKAPNGPGVWGDSISSTAVNNAAAAAVAKSG
HAWSGTGNQEDKSPTWGEPQKPKSQTWGDGQKSNPAWSAGGGDWADSSSVLGHLGDGKKN
GSGWDADSNRSGSGWNDATRSGTSGWGNGTNAKVNPGTNWGESLKPGPQQNWAGKPQDSN
VSNWGGAASVKQTGTGWIGGPVPVKQKDNSEATGWEEPSPPSIRRKMEIDDGTSAWGDPS
NYNNKTVNMWDRNNPGMQSSTTAAATTTTTTTSSSTDVVETPPSHQAGAQLSRSPLLGPV
SSGWGEMPNVHSKAESSWGEPSSPSALVDNGTAAWGKPPSSGSGWGDQPAEPPVTFGRAG
APTAAPALCKPASKSMQEGWGSGGDDMNLGASQWEDEEGGMWNSAASQESASSCASWGNA
PKKGLPKGMKTSGKQDEAWIMNRLIKQLTDMGFPREPAEEALRSNNMNLDQAMSALLEKK
VDVDRRGLGVTDYNGGVTKALGCRPPVSKDSSGDRPTFLDKDGGLAEEPTTSPFLPSPSL
KLPLSNSALPNQALGGIASGLGMQNLNSSRQIPSGNLGVFGSSGAAQARTMQQPPQPPVQ
PLSSSQPSLRAQVPPFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQHMTMLNQLYQLQL
AYQRLQIQQQMLQAQRSVSGPVRQQEQQVARTITNLQQQIQQHQRQLAQALLVKPPPPPP
HLSLHPSAGKSAMDSFPPHPQAPGLPDLQTKEPQSSPGTFAPYPLAGLNPNMNVSSMDMT
GGLSVKDPSQSQSRLPQWTHPNPMDNLPGAAPPLDQNPSKHGAIPGGLSIGPPAKSSIDD
SYGRYDLIQNSESPASPPVAVPHSWSRAKSDSDKISNGSSINWPPEFHPGVPWKGLQNID
PENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGSSPPSSQSAALPSSSAWPLSASGYGR
SFSSIAPAPSIAGKLSDIKSTWSSGPASHTQASLSHELWKVPRNTTAPTRPPPGLTNPKP
SSTWGASPLGWTSSYSSGSAWSTDTSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLVTF
HLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQAVPSTS
GWQSGTGAGQARLGASGGSHGLVRSDTGHWSAPCLAGKGSSDLLWGGVPQYSSSLWGPPS
SDDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgacacgtgggctgaaagaacagccacggaagcactagtgcgctcaggacaa
ctggccgtggccccgagaagtggccccgtttttagtgccccttcttggagcgcccttctg
cctaccatttggtttaagagggactttatactaatgccatctttctttatgttgaacagg
gagaaagaacaagaaacacaaaaagaggaacgtttgatggaagaaaagaaaaagaaaaag
caggaagaaaagaaaaagaaggaaggtgctcagaaaaaggctgctgatcaaaaaaccaaa
gtgccagaacctcccaagacctgttcgagccagccccagcctgccggtaccgccgccagc
gtttgcaccagcgccctgccgagcggcggcaatggcaaacgcgcgtccgccagcagccag
cagccggctgcgccccgttacctgcctcgcgaggtgcctccacgcttccgccagcaagaa
cagaagcagctgttaaagagaggccagccgttgcctgccggggctctggccagcgtgagc
ccgacccagggcgctgggcccgcaggcgtaagccctcctcccctccctggagccggagca
cagcagcaccccagtaagctccaagcagatctcagtcacggcggatcggcagatcactat
gacagttcccaccggggacagcagcccacgcacagaagcgaagccagttgcagctgggac
caagtgatcacagacaggaccgacaaggaggcgtggccttccatcacaggaacggagact
gagtctgcctcagaatgcactacggacactgactctgcctccaactgtggctcggagaac
agtagcatggctacggggagtgcccagggcgccttcaccggacacaccaagaagacgaac
ggcaataatggcaccaacggggtgcccgtccagagcccttctaaccagggtgccctggga
gcagggggcgccaacgggaacgggaacgcggcccgagtgtggggcgtagccgcgggcccc
ggctcgggcccagctcactgctccctcggcggcggggatgggaaaatggacagcatgatc
ggagacgggagaagccagaattgctggggtgcttccaactccaatgccggcattaatctc
aacctgaaccctaatgccaacccggctgcctggcccgtactcggacacgaaggaactgtg
gcgacaggcaacccttccagtatttgcagtccggtcagtgccataggtcaaaacgcgggc
aaccagaacgggaacccgccgggcactttaggtgcttggggaagcctgctgccgccggag
agcacagaaccacaaacgtccgcttctcagaatgtgtctttcagcgtacaacctcagaac
cttaacactgatggaccaaataacactaaccccatgaactcttcgccaaaccctgtcaat
gcaatgcagacgaacggactgccaaactggggcatggccgtcggcatgggggccatcatc
ccaccccacctgcaaggccttcctggtgctaacggatcctcggtgtctcaagtcggaggg
agcggcggcgaaggactcggcggttccgtgtggggcctgtccccgggtaaccctgccgcg
ggaagcagcagttctggcttcggtcaggggaatggagacactgtgaactcggcgttgagt
gctaaacagaacggatccagcagtgcggcgcagaaggaaggaagtggcggtaacgcctgg
gactcgggccctcctgccggccccgggctcctcgcctggggacggggcggcggcaacagc
agcggcgtcggtcacatccattcgggggcttggggccaccccacccgaagcgcctctaac
ggtgtgaatggggagtgggggaagcccccaaaccagcattccaacggtgacggcaacggg
aaaggatcgacagggtgggacggtccgagcgtcagcggccagaatcctgccgtgcagccc
ggcagcgagcacgtgaactcttgggccaaagccgcgtcttctggaaccacggcaagcgaa
ggaagtagcgacagttccggcagtcaccacgaagggggctccgggagggaaggagcagaa
ggccggaggcgagataaagggatcctagaccaagggcatatccaattgccaaggaacgat
ctggacccaagagtcctgtctaatactggttggggacagactcccgtaaagcaaaacact
gcctgggaatttgaagagtcccctaggtctgagaggaaaaatgacaacgggacagaggcc
tggggctgtgcggctcctcagccttcacactcaggggcgaagagtgatgggtccatcgtg
agcagtacaaatacctctgcagtatccgggtgggtcagctcaccgcctgctgctgcgccg
gcgagcacagggtggggggacggcagcaacaaagcgccaaatggcccgggggtctggggg
gactcgataagctctactgctgttaataatgctgctgctgctgctgtcgccaagagcggc
cacgcttggagtgggaccggaaaccaggaggacaagtcgcccacctggggggagccccag
aagcccaaatctcaaacctggggagacggacaaaaatccaatccggcctggagcgctgga
gggggagactgggcggactcgtcttccgtcctcggacacttgggggacgggaaaaaaaat
ggctctggatgggatgccgacagtaatcggtcagggtctggttggaacgacgctaccagg
tctgggaccagtggctggggtaatggcacaaacgcaaaggtgaatccagggacaaactgg
ggagagtctttaaaacctggcccccaacagaactgggcgggcaaaccccaagacagcaat
gtgagtaactggggaggagccgcttccgttaagcagacgggaaccgggtggatcgggggt
ccggtccctgtcaaacagaaggacaacagtgaggccacgggctgggaggagccttctccg
ccatccatccgacgcaaaatggaaatcgatgatggtacctcagcttggggtgacccgagc
aactacaataataaaactgtaaacatgtgggatagaaacaacccgggcatgcagagcagt
accacggccgccgccaccaccaccaccaccaccacgagcagcagcacggacgtggtcgag
acgccgccgtcacaccaggccggcgcccagctgagtcgatcgccgctgctcggtccagtc
tcatcgggctggggagagatgcctaacgtccattcgaaggctgagagctcttggggagag
ccgtcctccccctctgccctggttgacaacggcaccgcagcgtggggcaagccgcccagc
agtggcagcggatggggggaccagcccgcggagccgcccgtgaccttcgggagagccggc
gcccccactgccgccccggccctgtgcaaaccagcttcgaaatctatgcaagaaggctgg
ggcagtggtggggacgacatgaacctcggtgccagtcagtgggaagacgaagaagggggc
atgtggaacagtgctgcttcccaagaaagcgcgtcctcctgcgcctcctgggggaacgcc
cccaaaaaaggactcccaaagggcatgaaaacgtctggcaagcaggacgaggcctggatc
atgaaccggctgatcaaacaactcacggacatgggcttcccgagagaaccagctgaagag
gccttgaggagcaacaatatgaatcttgaccaggccatgagcgccctgctggaaaagaag
gtggacgtggacaggcgtggactgggagtgaccgactacaatggaggggtcaccaaagcc
cttggctgccgcccaccagtctccaaagactcttccggggaccgccccacctttcttgac
aaggacggcggcctggcggaagagcccacgacttcaccatttttgccttcaccaagcctg
aagctccccctttcaaacagtgcactccctaatcaggccctgggtgggattgcctcaggg
ctgggcatgcaaaacttgaattcttctagacagatcccgagtggcaatctgggtgtgttc
ggcagcagcggagcagcacaagccaggaccatgcaacagccgccgcagccgcccgtgcag
cctctgagctcctcccagcccagcctccgcgctcaagtgcctccgtttctatcccctcag
gttcaagcacagcttttgcagtttgcagcaaaaaacattggtctcaaccctgcactattg
acctcgccgatcaatcctcagcatatgacgatgttgaaccagctctatcagctgcagctg
gcataccaacgtttacaaatccagcagcagatgctacaggctcagcgcagcgtttccgga
cccgtgagacaacaggaacagcaagtcgcgcgcacaatcactaacctgcaacagcagatc
cagcagcaccagcgccagctggcccaggccctgctcgtgaagccgccgccgcccccgccg
cacctgtctctgcacccctctgcaggcaaatcggccatggacagcttcccccctcacccc
caggcccccggcctgcctgacctgcagaccaaagagccgcagtcttcacccggcaccttt
gctccctaccctctcgctggactgaacccaaacatgaatgtcagcagcatggacatgact
ggcggtttgtcagtgaaagacccgtctcagtcccagtcccgcctccctcagtggacacac
cccaacccgatggacaacctgcccggtgctgctcctcccctcgaccagaaccccagcaag
catggtgctatccccggaggcctgagcatcgggcctccggctaagtcctccattgacgac
tcctatggccggtacgatttaatccagaacagtgagtcaccagccagtcctccggtagct
gttccccatagctggtcacgtgccaaatctgacagtgataaaatctcgaatggctccagc
atcaactggcccccagaattccatcctggagtcccgtggaaaggacttcagaacatagac
cctgagaacgaccccgacgtcactcctggaagtgtccccaccgggcccaccatcaatacc
accatacaggacgtcaaccgctacctcctcaagagtggagggtcctccccaccgtcatct
cagagtgccgcgctgccttcctcgagtgcctggccgctcagtgcctccggctacggtcgc
tccttcagcagcatcgcaccggcgcctagcattgcaggtaaactgtcagacattaaatcg
acgtggtcctctggccctgcctcccacacgcaagcctctctgtctcacgaactgtggaag
gtgcccagaaacactactgcacccacgaggccgcctccagggctaaccaatcccaagcct
tcctccacctggggagccagccccctcggctggaccagctcttactcctcgggttccgcg
tggagcaccgacacctcaggaaggacaagcagctggctcgttctccgcaacctcacgccc
cagatcgacggctctaccctacggacgctgtgtttgcagcacgggcctctcgtcacattc
cacctgaacctgacccaaggcaacgccgtggtccgctacagctccaaggaggaagccgcc
aaggcccagaagtccctgcacatgtgtgttctgggaaacaccaccatcctggccgagttt
gctggcgaagaagaggtaaatcgtttcctggcccaaggccaggcggtgccgtccacctcc
ggctggcagtcgggcaccggggccggccaggcgcggctgggcgcctcgggcggctcccac
ggcctggtgcggagcgacaccggccactggagcgccccgtgtctggccggcaaagggagc
agcgacctgctgtggggcggggtcccccagtactcaagcagcctctggggccctcccagc
agtgacgacggcagggtgatcgggagccccaccccgctgaacaccctgctgcccggcgac
cttctcagcggggaatccatctag
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