Panthera uncia (snow leopard): 125926865
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Entry
125926865 CDS
T08832
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc03030
DNA replication
puc03420
Nucleotide excision repair
puc03430
Mismatch repair
puc03440
Homologous recombination
puc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125926865
03420 Nucleotide excision repair
125926865
03430 Mismatch repair
125926865
03440 Homologous recombination
125926865
03460 Fanconi anemia pathway
125926865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
puc03000
]
125926865
03032 DNA replication proteins [BR:
puc03032
]
125926865
03400 DNA repair and recombination proteins [BR:
puc03400
]
125926865
Transcription factors [BR:
puc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125926865
DNA replication proteins [BR:
puc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
125926865
DNA repair and recombination proteins [BR:
puc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
125926865
MMR (mismatch excision repair)
125926865
DSBR (double strand breaks repair)
HR (homologous recombination)
125926865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
125926865
NCBI-ProteinID:
XP_049492708
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All DBs
Position
E1:44421434..44495602
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AA seq
618 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPVLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNHLVEGEQLSSNCICQINRFIVNTLKDGRRVIILMELDILKSAEAVGLKIGNPVPYNE
GHGQQQVVPSPASAANPPASKPQQQNGSSGMGSTASKTYGASKIFGKAGATNLANTGSGG
TQVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFN
EQVDKFFPLIDMNKVYYISKGTLKIANKQFTAVKNDYEMTFNNETSVVPCEDGHHLPTVQ
FDFTAIGDLENKSKDSLIDVIGICKSYEDATKIIVKSNNREVSKRDIYLMDMSGKVVTTT
LWGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEG
QALDGVSISDLKSGGTGGSNTNWKTLYEAKSENLGHGDKADYFSCVATVVFLRKENCMYQ
ACPAQDCFKKVIDQQNGLYRCEKCDSEFPSFKYRMILSANIADFQENQWVTCFQESAEAI
IGQTTAYIGELKEKNEQAFEEVFQNANFRTFIFKIRVKLETYNDESRIKATVMDVKPVDY
REYGRRLIMNIKRNALMM
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccataatgcaacagggagacacttcc
ataaaacctgtcctccaggtcattaacatccgtcccatcactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagttgaaccatctcgttgagggagaacaattgtctagcaactgtatttgccagattaac
cgatttattgttaacactctgaaagatggaaggagagtaattattttgatggagttagac
attttgaaatcagctgaagcagttggattaaagattggcaatcccgtgccctataatgaa
ggacacgggcagcagcaggtagttccttctccggcctcagcagccaacccgccagccagc
aagccccagcaacagaatgggagctcagggatgggttccactgcatctaagacttatggt
gcctcaaagatatttggaaaagctggagctaccaacctagcgaacacaggttctggagga
acacaggtcaaagtggtacccatcgccagcctcaccccttaccaatccaagtggactatc
tgtgctcgagttaccaacaaaagtcagatccgtacctggagtaattcccggggggaaggg
aagctcttctccctagaactagttgatgaaagtggtgaaatcagagctactgctttcaac
gagcaagtggacaagttttttccccttattgacatgaacaaggtctattacatctctaaa
ggcaccctgaagattgctaacaaacagttcacagctgttaaaaatgactatgagatgacc
ttcaataatgagacttccgtcgtgccctgtgaagatggtcatcacttaccaacagttcag
tttgatttcacagcgattggtgacctggagaataagtctaaagattctctgatagacgta
attgggatctgcaagagctatgaagatgccaccaaaatcatagtgaagtctaacaacaga
gaagtttcgaagagagacatctatttgatggacatgtcggggaaagtggtgaccactact
ctgtggggagaagatgctgatagatttgatggttctagacaacctgtgatggctatcaaa
ggagccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcacggtc
attgtgaatcctgacatcccggaggcctataagcttcgtggatggtttgactctgaagga
caagccttagatggtgtttccatctctgatctaaagagtggaggaacaggaggtagcaac
accaactggaaaactctatatgaggctaaatcagagaacctaggccatggtgacaaggcc
gactattttagctgtgtggcgacagttgtgtttcttcgcaaagagaactgtatgtatcaa
gcctgcccagctcaggactgctttaagaaagtgattgatcaacagaatggattgtaccgc
tgtgagaagtgtgatagtgaatttcccagcttcaagtaccgcatgatcctgtcagcaaat
attgctgattttcaagagaatcagtgggtcacctgtttccaggagtctgcggaggccatc
attggacaaaccactgcttatattggggagttaaaagagaagaatgagcaagcatttgag
gaagttttccagaatgccaacttccgaactttcatattcaagatcagggtgaaactagag
acctacaatgatgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactac
agagaatatggcagaaggctgatcatgaacatcaagagaaatgcactgatgatgtga
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