Paenibacillus urinalis: PUW25_08085
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Entry
PUW25_08085 CDS
T08959
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pui
Paenibacillus urinalis
Pathway
pui03030
DNA replication
pui03430
Mismatch repair
pui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PUW25_08085
03430 Mismatch repair
PUW25_08085
03440 Homologous recombination
PUW25_08085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pui03032
]
PUW25_08085
03400 DNA repair and recombination proteins [BR:
pui03400
]
PUW25_08085
Enzymes [BR:
pui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PUW25_08085
DNA replication proteins [BR:
pui03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PUW25_08085
DNA repair and recombination proteins [BR:
pui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PUW25_08085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6282
CAF20
Motif
Other DBs
NCBI-ProteinID:
WDI03898
LinkDB
All DBs
Position
1758737..1762345
Genome browser
AA seq
1202 aa
AA seq
DB search
MSSFVHLHVHSEYSLLDGAARIAELVDTAAGYGMEALALTDHGVMYGAIPFYKACAAKGI
KPIIGCEVYITAGSRHERGSRKDQPIYHLILLAQNMTGYQNLMRLCSIGHLEGFHYKPRI
DMESLAKYNEGLICLSACLGGEIPQHLLMGRYDEAKSAAMRHKQIFGDRYYLELQDHGLA
EQKRVNPQLIELAAELSIPLVATNDVHYLSQEDAEVQDVLICIGTGKTVEDEERLKIPSS
QLYLKNGDEMARLFPHVREAVENTLKIADRIQLDLEFGHSILPEYRPIPEHLTPGQYLRE
LCLKGLEERYKDTDNWHHEEQRSELNKRLDYELSVIDKMGFSDYFLIVWDFIAYAHREGI
ATGPGRGSSAGSLVAYVLNITNVDPMKYRLLFERFLNPERVTMPDIDIDFSDERRDEVIE
YVASKYGREHVAQIITFGTLAARAAVRDVGRVLNIPYGEVDKAAKLIPGQVGMNITKALE
ISDELRVLHDTKAKTRELLTMAKKVEGMPRHASTHAAGVVISKDPLTDVVPLQEGSEGTA
LTQYSMENLEAIGLLKMDFLGLRTLSIIERCMRWIQDQQKQVPDFKTVPDDDPLTYEMLG
SGDTTGIFQLESAGIRRVLKDLKPSVFEDIISVVALYRPGPMDFIPKYIQGKHGEIKVEY
PHADLAPILEDTYGIIVYQEQIMQIASLMAGFSLGEADLLRRAVSKKKREVLDKEREHFV
KGSLNQGYSSEDAEAVYDMIVRFANYGFPRAHAAAYGVLAFQTAYLKTHYPVEFMASMLT
AVMGNHRKVAEYVVECRRMNIPVLPPDVNESGVLFTPGGGETGIRFGLAAIKNVGTQAVD
SIIAERAKGPFESLLDFCRRVDLRVCNKRVIESLIQAGAFDTLPGHRAQLFAMLDEVVEA
ATKWRKEREDLQIQLFDFVETPNWEIEYPDIPKYTITQQLELERELLGLYLSGHPLDDFT
EVLEELEADKLMELHDAQEHAQIVTAGMVVSVKSITTKQGKAMAFMELEDQIERTEVVLF
PEVWRRSQNLAAKGQLIALRAKVQLQDEGFKLLADEVDELSTDKLQRMMQQRNRGSGGKE
RSSSEEASQPKVGRNRRSTSPPNSGSGRAQNKSDSQGVVTDRKPARGEQRVFIKIKPDIE
KSGMLTKLKVLLQEHPGNVATILFYEETREYRALSDSYRINPSPELIHRMEQMLGEDTVI
VK
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatttgtgcatctgcatgttcacagtgaatacagcctgctagatggtgcggcg
cggattgcagagctcgtggacacagcagcaggatacgggatggaagctctggccctgacg
gatcatggggttatgtatggagccattcctttttataaagcatgtgcagctaaaggaatt
aagccgattatcggctgtgaagtgtatattacagcaggctcaagacatgaacgcggcagc
cgcaaggatcaaccgatctatcatcttatattgctggcgcagaacatgaccgggtatcaa
aatctgatgaggctgtgctccattggtcacttggagggctttcactataagccgcggatc
gatatggagagcctggcgaaatacaacgaaggattgatatgcctcagtgcctgtctcggg
ggagaaattcctcagcatcttctgatgggacgatatgatgaagccaaaagtgcagccatg
aggcacaaacagatctttggagaccgatactatcttgagcttcaagatcatggtctggca
gagcagaagcgagtgaatcctcagctgattgagcttgccgcagaattgtccataccgctt
gtagcaacgaatgatgtgcactatttgtctcaagaggacgccgaggtgcaggatgtcctt
atatgcattggtacgggcaaaacggtggaggatgaggaacggcttaagattccctcaagc
cagctatatttgaaaaacggcgatgagatggctcgtctttttcctcatgtgagagaggcg
gtagagaatacccttaaaattgctgaccgcattcagcttgatctggaatttggacattcc
attctgcctgagtaccggccgatccctgagcatctgacgcctggacagtatttgcgcgaa
ctctgcctgaaggggctggaagaacgctacaaggatacggataactggcatcatgaagag
cagagatccgagctgaataaacggctggattacgagctgtccgtcattgataaaatgggc
ttctctgattatttcctcatcgtatgggatttcatcgcctatgcgcatagagagggaata
gcaaccggtccgggacggggctcctccgcaggaagtctcgttgcctacgtactgaatatt
actaatgtggatccgatgaaatacaggcttttgtttgagcgatttctcaaccctgagcgg
gtgaccatgccggatatcgatattgatttcagtgatgaacgccgggatgaagtgattgaa
tatgtcgcttctaaatatggacgcgagcatgtcgcacagattattacttttggtacgctt
gctgcgcgtgcagccgttcgagatgtaggaagagtgcttaatattccgtatggggaagtg
gacaaggctgccaagctcattcccggacaagtggggatgaatatcaccaaagctctggag
ataagcgatgagcttagagtactgcatgataccaaagccaaaacaagagagctgctcaca
atggccaaaaaggtcgaaggcatgccaaggcatgcttctacgcatgcggcaggtgtggtt
atatccaaagacccgctgaccgatgtagtgcctctccaggagggcagtgaagggaccgcg
cttactcaatattccatggagaatctcgaagccatcggactactcaagatggacttcctt
ggactgaggactctctccatcattgaacgctgtatgcgatggattcaggatcagcagaag
caagttccagatttcaaaacagttccggatgatgatccgctaacctatgaaatgctcggt
tctggagatacgacaggtatattccagctggagtcagccggaatcagaagagtgctgaag
gatttgaagccttccgtatttgaagatattatctctgtggttgctttatatcgtccgggt
ccgatggatttcattcctaagtatatccaaggaaagcatggggagatcaaggtcgagtac
ccgcatgctgatctcgctccaatacttgaggacacctacggtatcatcgtgtatcaggag
cagattatgcagattgcttctctaatggcaggcttttctcttggagaagccgatctgctc
cgcagggcggtatcgaagaagaaacgggaagtgcttgataaagagagagagcactttgta
aaagggagcctgaatcagggctatagcagcgaggatgctgaagctgtgtacgatatgatt
gtacggtttgccaattacggcttccctcgggcccatgctgctgcgtatggagtattggcc
tttcagacggcgtatctgaagacacattatcctgtcgaatttatggcttcgatgctgacg
gcggtcatgggaaatcatcgaaaagtagcagagtatgttgtcgaatgcagacgaatgaat
attcctgtgctgccacctgatgtaaatgaaagcggagtgctgtttactccgggcggtggt
gagacgggcattcgctttggtctggctgccattaaaaatgtaggtacacaggccgtagac
agcattattgcagagcgggccaagggaccgttcgagagtctgctcgatttttgcagaaga
gtggacctaagagtatgtaacaagcgggtcatagaatctcttatacaggccggggctttc
gatacattgcctggtcaccgtgcgcagctgttcgccatgcttgatgaagtggtagaagcg
gccacgaaatggcgcaaagagagagaggatctgcagatccagctgtttgattttgtggag
actccgaattgggaaattgaatatccggatatacctaagtacacgattacacagcagctt
gaattagaacgcgagctgcttggattatacctatccggtcacccgcttgatgattttacg
gaagttctggaagagctcgaagcggataagctgatggagcttcacgatgcacaagagcat
gcgcagattgttacggccggaatggtcgtttccgtcaaatcgattactacgaagcaaggc
aaagcgatggccttcatggagctggaggatcagatcgaacggaccgaagtggtattgttt
cccgaagtgtggagaagaagtcagaacttagcggcaaaaggtcaattaattgcgctccgg
gctaaagttcagcttcaggatgaaggcttcaagctgcttgctgatgaggtggatgagctt
agtacagacaagttgcagcgtatgatgcagcagcgtaacagagggagcggaggtaaagag
cgaagcagttcggaagaagcttcacagcctaaagtcggcagaaatcgtcgttctacttct
ccgcctaacagtggaagtggacgggcgcaaaataagtcagatagccaaggggttgtaacg
gataggaagcccgccaggggcgagcagcgagtattcatcaagattaaacctgacatagag
aagtcggggatgctcactaagcttaaggtcttgttacaggaacatccgggaaatgtagct
acgatccttttttatgaagaaactagggagtatcgggcattaagtgacagttatcgaatt
aatccctctcctgaactgattcaccgtatggaacaaatgctcggggaagataccgttatc
gtgaaataa
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