Psychrobacter urativorans: AOC03_01985
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Entry
AOC03_01985 CDS
T04087
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
pur
Psychrobacter urativorans
Pathway
pur02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pur00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AOC03_01985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pur03021
]
AOC03_01985
Transcription machinery [BR:
pur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AOC03_01985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
CP_ATPgrasp_1
Motif
Other DBs
NCBI-ProteinID:
ALF58969
UniProt:
A0A0M4U3H7
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All DBs
Position
477408..479327
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AA seq
639 aa
AA seq
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MNDKSVSKSTSQLATLIQMGKEQGYLTYAEVNDQLPDSITESDQIEDIVQMLTDVGIKIF
ESAPDADDILMNDDSNDDESAADEAAAVLAAVETDPGRTTDPVRMYMREMGTVDLLTREG
EIAIAKRIEEGIRDVQHAMSYWPGTVQFVLDEYQKVQDGEKKLSDVITGFLDPETEEDKA
ATLAAKEAAKEEAAAAKEEKFPVIKAKSKAKIDLDDDEEEEVEVAEDDDAEEETGGIDPE
EVRLRLEEIEGLFITAKQALLDYGRGSVQASEAYEQLACRFMMLKLNNRLSDQVMAIMHD
VYDDVRKQERQIMRLVIRRGRMPREEFRKTFPSNETNVDWLTERLKGKPGFAATLEKVTD
DVILLQRAIRDYEHKLDMEIHDMKDVARRMAVGEAKARRAKKEMVEANLRLVISIAKKYT
NRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVH
MIETINKINRVSRQLLQEMGREPTPEELGERLEMDEAKVRKVLKIAKEPISMETPIGDDE
DSHLGDFIEDGTISSPVDDATAAGLREATRDVLGNLTEREARVLKMRFGIDMPTDHTLEE
VGKQFDVTRERIRQIEAKALRKLRHPSRSEHLRSFLEND
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataagtcagtttctaagtccacatctcaactggccaccttaatccaaatgggt
aaagagcaagggtatctgacctatgctgaggtgaatgatcagttgcctgactcgatcaca
gaaagtgatcaaatcgaagatatcgtgcagatgttaaccgacgttggtatcaaaatcttt
gaatccgcgcctgatgctgatgacatcttgatgaacgatgattctaatgatgatgaatcg
gcagcagacgaagccgccgccgtattggcagcggttgaaaccgatccgggtcgtaccact
gaccctgtgcgtatgtatatgcgcgagatgggtacggttgacttgctgacccgtgaaggc
gaaattgccattgccaagcgtatcgaagaaggtattcgtgacgttcagcacgccatgtct
tattggccgggaacggtgcaatttgtactagatgaatatcaaaaagtacaagatggcgaa
aagaaactttctgacgttattactggctttttagatcctgagactgaggaagacaaagcg
gcaacgttagctgcgaaagaggcagcaaaagaagaagccgccgccgcgaaagaagagaaa
tttcctgtcattaaagcaaaatctaaagccaaaatcgacttagacgatgacgaggaagaa
gaagtagaagtggctgaagacgacgatgccgaagaagaaactggtggtatcgatccagaa
gaagtgcgcctgcgtttagaagaaatcgaaggcttatttattactgctaaacaagcgttg
ctcgattatggtcgtggtagcgtacaagcaagcgaagcttatgaacagctcgcctgccgc
ttcatgatgctcaaacttaataatcgcctatcagaccaagtcatggcaattatgcatgat
gtgtatgacgacgtacgtaagcaagaacgtcaaatcatgcgtttggtgattcgccgtggt
cgtatgccgcgtgaagaattccgtaagacctttccaagtaatgaaaccaacgttgattgg
ctcactgaacgtctaaaaggtaagcctggctttgccgcgacgttagaaaaagtcaccgat
gatgtaattttactgcaacgtgctattcgtgattacgagcataagctcgacatggaaatc
cacgacatgaaagacgtcgctcgccgtatggcagttggtgaagctaaagcccgccgtgct
aagaaagaaatggttgaagccaacctacgtctggtcatttcaattgctaaaaagtatacc
aaccgtggtcttcagttcttggatttaattcaggaaggtaatattggcttgatgaaagcg
gtagataaatttgaatatcgccgtggttataaattctcaacctatgcgacatggtggatt
cgtcaggcaatcacccgctctatcgctgaccaagcacgcaccattcgtattccagtgcat
atgattgagaccattaataaaattaatcgtgtctctcgtcaattattacaagaaatggga
cgcgagccgacgcctgaggaattaggcgaacgcttagagatggatgaagctaaagtccgt
aaagtgcttaaaatcgctaaagaaccgatctctatggaaacccctatcggtgatgatgaa
gattcacacctaggcgatttcattgaagatggtacgatttcaagccctgttgacgatgcg
acggctgctggtctacgtgaagcgacgcgtgatgtacttggtaacttaacggaacgtgaa
gcacgcgtgctgaaaatgcgttttggtatcgatatgccaaccgatcatacgctagaggaa
gtcggtaagcagttcgatgtcacgcgtgagcgtattcgtcagattgaagcaaaagcttta
cgtaaattacgtcatccatcacgttctgaacatttgcgctcgttccttgaaaatgactag
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