KEGG   Psychrobacter urativorans: AOC03_01985
Entry
AOC03_01985       CDS       T04087                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03086  RNA polymerase primary sigma factor
Organism
pur  Psychrobacter urativorans
Pathway
pur02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pur00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AOC03_01985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pur03021]
    AOC03_01985
Transcription machinery [BR:pur03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AOC03_01985
SSDB
Motif
Pfam: Sigma70_ner Sigma70_r3 Sigma70_r1_1 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 CP_ATPgrasp_1
Other DBs
NCBI-ProteinID: ALF58969
UniProt: A0A0M4U3H7
LinkDB
Position
477408..479327
AA seq 639 aa
MNDKSVSKSTSQLATLIQMGKEQGYLTYAEVNDQLPDSITESDQIEDIVQMLTDVGIKIF
ESAPDADDILMNDDSNDDESAADEAAAVLAAVETDPGRTTDPVRMYMREMGTVDLLTREG
EIAIAKRIEEGIRDVQHAMSYWPGTVQFVLDEYQKVQDGEKKLSDVITGFLDPETEEDKA
ATLAAKEAAKEEAAAAKEEKFPVIKAKSKAKIDLDDDEEEEVEVAEDDDAEEETGGIDPE
EVRLRLEEIEGLFITAKQALLDYGRGSVQASEAYEQLACRFMMLKLNNRLSDQVMAIMHD
VYDDVRKQERQIMRLVIRRGRMPREEFRKTFPSNETNVDWLTERLKGKPGFAATLEKVTD
DVILLQRAIRDYEHKLDMEIHDMKDVARRMAVGEAKARRAKKEMVEANLRLVISIAKKYT
NRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVH
MIETINKINRVSRQLLQEMGREPTPEELGERLEMDEAKVRKVLKIAKEPISMETPIGDDE
DSHLGDFIEDGTISSPVDDATAAGLREATRDVLGNLTEREARVLKMRFGIDMPTDHTLEE
VGKQFDVTRERIRQIEAKALRKLRHPSRSEHLRSFLEND
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgaacgataagtcagtttctaagtccacatctcaactggccaccttaatccaaatgggt
aaagagcaagggtatctgacctatgctgaggtgaatgatcagttgcctgactcgatcaca
gaaagtgatcaaatcgaagatatcgtgcagatgttaaccgacgttggtatcaaaatcttt
gaatccgcgcctgatgctgatgacatcttgatgaacgatgattctaatgatgatgaatcg
gcagcagacgaagccgccgccgtattggcagcggttgaaaccgatccgggtcgtaccact
gaccctgtgcgtatgtatatgcgcgagatgggtacggttgacttgctgacccgtgaaggc
gaaattgccattgccaagcgtatcgaagaaggtattcgtgacgttcagcacgccatgtct
tattggccgggaacggtgcaatttgtactagatgaatatcaaaaagtacaagatggcgaa
aagaaactttctgacgttattactggctttttagatcctgagactgaggaagacaaagcg
gcaacgttagctgcgaaagaggcagcaaaagaagaagccgccgccgcgaaagaagagaaa
tttcctgtcattaaagcaaaatctaaagccaaaatcgacttagacgatgacgaggaagaa
gaagtagaagtggctgaagacgacgatgccgaagaagaaactggtggtatcgatccagaa
gaagtgcgcctgcgtttagaagaaatcgaaggcttatttattactgctaaacaagcgttg
ctcgattatggtcgtggtagcgtacaagcaagcgaagcttatgaacagctcgcctgccgc
ttcatgatgctcaaacttaataatcgcctatcagaccaagtcatggcaattatgcatgat
gtgtatgacgacgtacgtaagcaagaacgtcaaatcatgcgtttggtgattcgccgtggt
cgtatgccgcgtgaagaattccgtaagacctttccaagtaatgaaaccaacgttgattgg
ctcactgaacgtctaaaaggtaagcctggctttgccgcgacgttagaaaaagtcaccgat
gatgtaattttactgcaacgtgctattcgtgattacgagcataagctcgacatggaaatc
cacgacatgaaagacgtcgctcgccgtatggcagttggtgaagctaaagcccgccgtgct
aagaaagaaatggttgaagccaacctacgtctggtcatttcaattgctaaaaagtatacc
aaccgtggtcttcagttcttggatttaattcaggaaggtaatattggcttgatgaaagcg
gtagataaatttgaatatcgccgtggttataaattctcaacctatgcgacatggtggatt
cgtcaggcaatcacccgctctatcgctgaccaagcacgcaccattcgtattccagtgcat
atgattgagaccattaataaaattaatcgtgtctctcgtcaattattacaagaaatggga
cgcgagccgacgcctgaggaattaggcgaacgcttagagatggatgaagctaaagtccgt
aaagtgcttaaaatcgctaaagaaccgatctctatggaaacccctatcggtgatgatgaa
gattcacacctaggcgatttcattgaagatggtacgatttcaagccctgttgacgatgcg
acggctgctggtctacgtgaagcgacgcgtgatgtacttggtaacttaacggaacgtgaa
gcacgcgtgctgaaaatgcgttttggtatcgatatgccaaccgatcatacgctagaggaa
gtcggtaagcagttcgatgtcacgcgtgagcgtattcgtcagattgaagcaaaagcttta
cgtaaattacgtcatccatcacgttctgaacatttgcgctcgttccttgaaaatgactag

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