KEGG   Parachlamydia acanthamoebae: PUV_10690Help
Entry
PUV_10690         CDS       T01552                                 

Definition
(GenBank) putative DNA ligase-like protein Rv0938/MT0965
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
puv  Parachlamydia acanthamoebae
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:puv00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    PUV_10690
Enzymes [BR:puv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PUV_10690
DNA repair and recombination proteins [BR:puv03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     PUV_10690
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
1173410..1175794
Genome map
AA seq 794 aa AA seqDB search
MSLGEYRSKRDLNKSKEPSAGKNKRSDALNFCIQKHAARRLHYDFRLEYKGVLLSWAVPK
GPSLDPYDKRLAIQVEDHPLDYQYFEGTIPKGNYGAGKVEIWDRGTYTVPHVTTREEIEK
YLTIGLKKGHFAVILHGEKLQGEFVFQKLKQDAEDTAWLLIKKEDAFATETDHDKPAKQV
KMPEFVTPMLATLADHPFSSEDWLFEIKWDGYRALAFIDPNNVQLKSRNRILLNDRFPVI
VDSLKKVKDKVIFDGELVVLDSAGKSDFQLMQNYQKDHAGVLYYYVFDLLYKDGQDLRNL
PLIERKNLLKKLLKELNLPLIRYSDHIVKDGEDFYKEAVKNKLEGIIGKKVTSTYQSRRS
QDWVKIKTALRQEVVIGGFTEPRGSRKKFGALLVGVYDDQGELHYVGHVGGGFTDELLED
VYKQLLPLSQKKSPFKNIPKPNMPVTWIKPKLVCEVSFAEWTKDDIMRQPIFRGLRIDKN
PKEVKKEIPTASEEKKGRTSKRQELELTNLDKLYWPKEKYTKGDLIAYYQKVAPYLLPYL
RNRPITLHRFPDGIEGKDFYQKNIDFSHPDWLKTFPVQHEGKVDHYLMISDLRSLLYAVN
LGSIDLHPFTSRCKNLEKPDYCIIDLDPHDIAFEKVIEIASATHELLERAKIKNYCKTSG
GKGLHIFIPLHAKYDYEQSKEFAHVIALCIHKQFPTITSVERSPQSRPKKIYLDYLQNRA
LQTIVAPYSVRPRPGALVSTPLLWEEVKPGLDPKDFDIHTILKRLDKMGDIFKPILGGGV
NMQTALNRLKKMFI
NT seq 2385 nt NT seq  +upstreamnt  +downstreamnt
atgagcttgggagaataccgctctaaacgagatctaaacaaaagcaaagaaccctctgcc
ggaaaaaataaacgttctgatgctttaaacttttgcattcaaaagcatgccgcaaggcgc
ttacattatgactttcgtttagaatacaaaggagttcttttaagttgggccgtgccaaaa
gggccttcacttgacccgtatgataaacggctagccatccaagtggaagaccatcctctt
gattatcaatattttgaaggaactattcccaaaggcaattatggcgctggtaaagtggaa
atatgggatcgaggaacatatacggtgccccatgtaaccacgcgagaggaaattgagaaa
tatctcacaataggtttaaaaaaagggcattttgccgtcattttgcatggtgaaaaacta
caaggagaatttgtttttcaaaagctcaagcaagatgcagaagacacggcatggctttta
attaaaaaagaagatgcttttgcgacagaaacagaccacgacaagcctgctaagcaagtc
aaaatgccagaatttgtgactcctatgctggccacattagctgatcatcctttcagtagc
gaagattggctttttgaaatcaaatgggatggctatcgggccttagcctttatagatcca
aacaatgtgcagttaaagtcacgcaatcgcattcttttaaatgatcgcttcccggttatt
gtggatagcttgaaaaaagtgaaggacaaagtcatttttgacggtgaactagtcgtttta
gactctgcaggtaaatcggactttcaactcatgcaaaattatcaaaaagatcatgcaggg
gtactctactattatgtgtttgatcttctgtataaagatggtcaagacctgcgcaatctt
ccccttattgaacgcaagaaccttttgaaaaagttgttaaaggagttaaatcttccctta
attcgttatagcgatcatatcgtgaaggatggagaggatttttataaagaagctgtaaaa
aataagctggaaggaattattggcaaaaaggtgaccagcacatatcaatctagaagaagt
caagattgggtaaaaattaaaacagccttgcgacaagaagttgtgattgggggtttcact
gagccgcgtggatcccgtaaaaaatttggagcgctattagttggcgtttatgatgatcaa
ggagagctacattatgttggacatgtgggagggggatttaccgacgaattgttggaggat
gtttataagcagctattgccattgagtcaaaaaaaatcgcctttcaaaaatatacctaaa
cccaatatgcctgtgacctggattaaacctaaacttgtatgtgaagtttcatttgctgaa
tggacaaaggatgacattatgcgacagcctatttttcgaggcctaagaatagataagaac
cctaaggaagttaaaaaggaaatcccaacagccagtgaggaaaaaaaagggagaacaagt
aaacgacaagaattggagctaaccaatttagataagctgtattggcccaaggaaaaatat
accaaaggggatctcattgcgtattatcaaaaagtagctccttatctattgccttacctt
agaaatcgccccattactttacaccgttttcctgatggaattgagggcaaagacttttac
caaaaaaatatagatttttctcaccccgattggttgaaaacatttcctgttcagcacgag
gggaaagtggatcattatctcatgatttcagatctacgcagcttgctttatgctgtgaat
cttggatccattgatttgcatccttttacatcgcgttgcaaaaatttggaaaaaccggat
tattgtattatcgatttggatcctcatgatatcgcatttgaaaaagtgatagaaattgcc
agtgcgacacacgagctattagaaagagcgaagattaaaaactactgcaaaacatcgggt
ggaaaaggactgcatatttttatccctttgcatgcgaagtatgactatgaacaatccaag
gaatttgcccatgtgattgcgctatgtatacacaagcaatttcctacaatcacttctgtc
gagagaagtcctcaaagcaggccaaaaaaaatttacttggattatctacaaaaccgtgct
ttgcaaactattgtggctccctattcagtgcgtccacgacctggtgcacttgtttctacg
ccccttttgtgggaagaggtaaaaccgggtttagatccaaaagattttgatatacacacc
attttaaaacgtctcgataaaatgggggatatctttaagccaattttggggggtggtgtc
aacatgcagacagccttaaaccgtttaaaaaagatgttcatttaa

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