Pantoea vagans C9-1: Pvag_0187
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Entry
Pvag_0187 CDS
T01326
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1b
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva00550
Peptidoglycan biosynthesis
pva01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pvag_0187 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pva01003
]
Pvag_0187 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pva01011
]
Pvag_0187 (mrcB)
Enzymes [BR:
pva01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Pvag_0187 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Pvag_0187 (mrcB)
Glycosyltransferases [BR:
pva01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Pvag_0187 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pva01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Pvag_0187 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PBP1_TM
UB2H
Transpeptidase
UvrB_inter
FtsA_C
TFIIA
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ADO08407
UniProt:
E1SDW2
LinkDB
All DBs
Position
204946..207474
Genome browser
AA seq
842 aa
AA seq
DB search
MSGNDREPIGRKGKPLPPRSSAGRGRRRDIEQDIDQDDFNDDEEEAPVPRKGKGGKPPRG
KRRWLGWIIKLFLVFVVVMAAWGIYLDSEIRSRIDGKVWQLPATVYGRMVSLEPGMAYNK
SEMVALLEGTQYREVSRITRPGEFSVKGNTIDLLRRPFDFPDSKEGQIHARMSFTKDELS
EIKNLETGRDFGFFRLDPRLITMLQSPNGEQRLFVPRTGFPDLLVDTLIATEDRHFYEHD
GISPYSIGRAFLANITAGKAVQGGSTLTQQLVKNLFLTNERSLWRKAREAYMAVIMDARY
SKDRILELYLNEVYLGQAGSDQIRGFPLASLYYFGRPVDELSLDQQAMLVGMVKGASLYN
PWRNPKLALERRNLVLRLLQQQKVIDQELYDMLSARPLGVQPKGGVITPQPAFMQMVRNE
LQAKLGDKIKDLSGVKIFTTLDPVSQDAAEKAVVDGIPTLKKQRGLKDLETAMVVVDRFS
GEVRAMVGGADPQYAGYNRALQARRSIGSLAKPATYLTALSQPNSYRLNSWIADEPIALK
QPNGTIWKPMNDDRRFSGKVMLVDALTNSMNVPTVNLGMTLGLDAVVDTWNKLGVPKEQL
HPVPAMLLGALNLTPVEVAQAFQSIASGGNRASLSAVRSVIAEDGSVLYQSYPQAQRVEP
AQAAYLTLYTMQQVADHGTARALGARFPNAHLAGKTGTTNDLIDSWFAGIDGKEVAITWV
GRDNNQPTKLYGASGAMQLYRRYLDNQAPMPLQLTPPEDVSMMNVDSAGNFVCGTGSSTW
RSLPVWALDPNALCQQQQQQVQQQQQLFDQQQQQPQQQPVQQPQEQKDSDGVAGWIKDMF
GK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggaacgatcgcgaaccaatagggcgcaaaggtaaaccgttgccgccgcgcagc
agtgcgggccggggacgacgcagggatatcgaacaggatatcgatcaggacgattttaat
gatgacgaggaggaagcgccggtgccacgtaaaggtaaaggtggaaaaccgccgcgcggc
aaacgccgttggctgggatggataattaaactgttcctggtgtttgtggtggttatggcc
gcgtggggcatctacctcgactcggaaattcgcagtcgtattgacggtaaggtgtggcaa
ctgcccgccaccgtctatggccgcatggtcagcctggaaccgggcatggcctacaacaaa
agtgaaatggtggcgctgctggaagggactcagtatcgcgaagtctcccgtatcacccgc
cccggcgagttttcggtgaagggcaacaccattgatctgctgcgtcgcccgtttgatttc
cccgacagtaaagaggggcagatccacgcgcgtatgagcttcacgaaagatgagctgagc
gagattaaaaacctcgaaaccggccgtgattttggctttttccgcctcgatccgcgcctg
atcaccatgctgcagtcgccgaatggtgaacagcgactcttcgtgccgcgcaccggtttc
ccggatctgctggtcgatacgctgatcgccactgaagatcgccatttctatgagcatgat
ggtatcagcccgtactccattggtcgcgctttcctggcgaacatcacggcaggaaaagcg
gtgcagggcggcagtacgctgacgcagcagctggtgaagaacctgttcctgaccaatgag
cgttcgctgtggcgtaaagcgcgtgaagcctatatggcggtgatcatggatgcgcgctac
agcaaagatcgcatcctggagctctacctgaacgaggtctatctcggtcaggcgggcagc
gatcagatccgcggtttcccgctggcgagcctctactactttggccgtccggtagatgaa
ctgagtctggatcagcaggcgatgctggttggcatggtgaaaggggcatcgctctataac
ccgtggcgcaacccgaaactggcgctggaacgccgcaacctggtgctgcgcctgttgcag
cagcagaaagtgatcgaccaggagctgtatgacatgctgtcggcgcgtccgctgggcgtg
cagccaaaagggggcgtgatcacgccgcagcctgcctttatgcagatggtgcgtaacgag
cttcaggcgaaactgggcgacaagattaaagatctctccggcgtgaaaatcttcaccacg
ctggacccggtgtcgcaggatgcagctgaaaaagcggtggttgatggcattccgacgctg
aaaaaacagcgcggcctgaaagatctggaaaccgcgatggtggtggttgaccgcttcagc
ggcgaagtccgtgccatggtcggcggggccgatccacagtacgccggttacaaccgtgcg
ctgcaggcgcgtcgctctatcggttcactggcaaaaccggcgacctacctcaccgcgctg
agccagccaaacagctaccgcctgaacagctggatcgccgatgagccgattgcgctgaag
cagccaaatggcaccatctggaaaccgatgaacgacgatcgtcgcttcagcggcaaagtg
atgctggtggatgcgctgaccaactccatgaacgtgccgacggttaacctcggtatgacg
ctggggctggatgcggtagtcgatacctggaacaagctgggcgtgccgaaagagcagctg
catccggtgccggcgatgctgctgggtgccctgaacctgacgccggttgaagtggcgcag
gcgttccagtcgatcgccagcggcggtaaccgcgcgtcactgtctgcggtgcgttcagtg
attgcagaagatggcagcgtgctctatcagagctatccgcaggcgcagcgtgtggaaccg
gcgcaggcggcttatctgacgctttacaccatgcagcaggtcgctgaccacggtactgcc
cgtgcgctgggcgcgcgtttcccgaatgcccatctggccggaaaaaccggtaccactaac
gatctgatcgacagctggtttgccggtattgatggtaaagaagtggcgatcacctgggtg
ggccgtgataacaaccagccgaccaaactctatggtgccagtggtgcgatgcagctctac
cgtcgctacctcgacaatcaggcaccgatgccgttgcaactgacgccgccggaagatgtg
tcgatgatgaatgtcgattcggccggtaactttgtctgtggcacgggcagcagcacctgg
cgttctctgccggtgtgggcgctggatccgaatgcgctgtgtcagcaacagcagcagcag
gttcagcagcagcaacagctgtttgaccagcaacagcaacagccgcaacagcaaccagtc
cagcaaccgcaggagcagaaagacagcgacggcgtagcagggtggataaaagatatgttt
ggcaaataa
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