Polaromonas vacuolata: HC248_03326
Help
Entry
HC248_03326 CDS
T06542
Symbol
intA_3
Name
(GenBank) Prophage integrase IntA
Organism
pvac
Polaromonas vacuolata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm-DNA-bind_3
Phage_integrase
Phage_int_SAM_3
SRCR_2
Motif
Other DBs
NCBI-ProteinID:
QJC57994
UniProt:
A0A6H2HEI6
LinkDB
All DBs
Position
complement(3607088..3608470)
Genome browser
AA seq
460 aa
AA seq
DB search
MALELIKGERVIHALKRGAKRLNDGGGLYLLPFASGDTHYWRLDYTHEGRRKTLSLGVHP
DVDLVMARQKSAKARATLAGGLNPSQERRQIRSVQLASIETEKRANAGLAPEGSFEAVAR
RWFAVKKDQWVDSYSSKVIRRLELHGMPRFGGKPLETITPKMILDACRAVEANDRLETAH
RLREHCSSVFRFAIAEGADLRDPCQDIRDALKRPPVRHFPAITKPDELADLLKAIEQYAG
TFVVRSALQLAPMLMVRPGELRLARWEEFDLDHGLWYIPSIRMKRTKDQKHNGQPHLVPL
ATQAVAVLEKLFAKTGDTGQVFPAEGRPGRFMSENTLNKAMRLMGYSSSQTTAHGFRATA
RTLIVEMLQIPESVVEAQLAHAVKDANGTAYNRTEFIKLRVEMMQTWAEYLEDLRLGRSK
VVHPVLPAFTPVSRRTPQRRSSLADLNRPSSGLDYRSLSK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcactggaattgattaagggcgagcgcgttattcacgcgcttaaacgtggggccaaa
cggctcaacgacggtggggggctttatctgcttcccttcgcaagtggcgatacgcattat
tggcggctagattacacacatgagggcaggcgcaagaccttaagtcttggcgtccatccc
gatgttgatctggtcatggcccggcaaaagtcggcaaaggccagagccacccttgcaggt
ggtctgaatccgtcgcaagagcgtcgacagatcaggtctgtacaactggcatccatcgag
accgaaaaacgggctaatgcgggccttgcgcctgaaggaagctttgaggcggtggccagg
cgctggtttgccgtcaaaaaagaccaatgggtcgatagctacagttccaaagtcatccgg
cgccttgaacttcacggcatgcctcgctttggcggcaagccgctggagacgatcacgccg
aaaatgattttggacgcctgtagggctgtcgaggctaacgataggcttgagactgctcac
cgtctgcgcgagcattgctcgtcggttttccggttcgcgattgctgaaggggccgactta
cgcgacccgtgccaagatatccgtgatgctctcaagcgaccccctgtgcggcattttcca
gccatcactaaacctgatgaattggccgatttactcaaggccattgaacaatatgcagga
acattcgttgttcgatctgcgttgcagctagcacccatgctgatggtccgacccggtgaa
cttcggttggcgcgatgggaggaattcgatctggaccacggcttgtggtacataccgtcc
atccgcatgaagcgaaccaaagatcaaaaacacaacggccaaccgcatcttgtgccgctg
gctacgcaggcggtagcggtgcttgaaaagttattcgcaaaaactggcgataccggacag
gtatttccggcagaagggcgtccgggccgattcatgtctgaaaataccttgaacaaggct
atgcggctcatgggctattcgtcaagccagacaactgctcatggctttagggccacagcg
cgaacgctgattgtggagatgctgcaaatcccagagtccgtggttgaggcgcaactggca
catgctgtgaaggacgctaacgggacggcatacaaccgcacagagttcatcaaactacgg
gttgagatgatgcagacgtgggctgagtaccttgaagatttacgcttagggcggagcaaa
gtcgtacatccggttttacctgcatttacgccagtgtcgcgtcgtacgccgcaaagacgt
tcgagtcttgccgacttgaaccggccttcaagcggactcgactaccgtagtctgagtaag
tag
DBGET
integrated database retrieval system
