Pseudomonas viridiflava: CFBP1590__5123
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Entry
CFBP1590__5123 CDS
T06554
Symbol
gabT
Name
(GenBank) 4-aminobutyrate aminotransferase GabT
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
pvd
Pseudomonas viridiflava
Pathway
pvd00250
Alanine, aspartate and glutamate metabolism
pvd00280
Valine, leucine and isoleucine degradation
pvd00310
Lysine degradation
pvd00410
beta-Alanine metabolism
pvd00640
Propanoate metabolism
pvd00650
Butanoate metabolism
pvd01100
Metabolic pathways
pvd01120
Microbial metabolism in diverse environments
Module
pvd_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CFBP1590__5123 (gabT)
00650 Butanoate metabolism
CFBP1590__5123 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CFBP1590__5123 (gabT)
00280 Valine, leucine and isoleucine degradation
CFBP1590__5123 (gabT)
00310 Lysine degradation
CFBP1590__5123 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CFBP1590__5123 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvd01007
]
CFBP1590__5123 (gabT)
Enzymes [BR:
pvd01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
CFBP1590__5123 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
CFBP1590__5123 (gabT)
2.6.1.48 5-aminovalerate transaminase
CFBP1590__5123 (gabT)
Amino acid related enzymes [BR:
pvd01007
]
Aminotransferase (transaminase)
Class III
CFBP1590__5123 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
SMS12709
UniProt:
A0A1Y6JSD8
LinkDB
All DBs
Position
I:complement(5722359..5723663)
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AA seq
434 aa
AA seq
DB search
MNSKVDETPHLLRQRDQFVPRGIVTAHPLVIDRAQGSEMWDVDGKRYLDFVGGIGVLNIG
HNHPNVVKAIQGQLEKVTHACFQVASYQPYVDLAKRLSLLVAGQSGIDHKAVFFTSGAEA
VENAVKIARAHTNRPAIISFRGGFHGRTLLGTTLTGMSQPYKQNFGPMAPEVFHTPYPNE
YRGVTSEMALAALHELLATQVAPDRVAAILIEPVQGDGGFLTAPVEFLKALRALTEQHGI
VLILDEIQTGFGRTGKWFGFEHAGIQPDLVTVAKSLAGGMPLSGVVGRAEIMDAPLPGGL
GGTYGGNALSCAAALAVIDTYEQENLLARGEQLGQHLRAGLLKLKERYSCIGDVRGTGFM
LAMEMIKDDAQRSPDADLNSKIIDQARIGGLLVIKCGVYRNVLRFLAPLVTTEQQIDEAL
TILDAALARVLKSN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaaagtcgacgaaacacctcatctgctccgtcagcgcgatcagttcgtgccg
cgcggcattgtcacggcccacccgctggtcatcgaccgcgcgcagggttccgagatgtgg
gacgtcgacggcaagcgttacctggacttcgtgggtggcatcggcgtgctgaacatcggc
cacaatcacccgaacgtggtgaaggcaattcagggccagttggaaaaagtgacccatgcc
tgctttcaggtggcgtcctaccagccttatgtggatctggccaagcgcctgagtctattg
gttgccggccagagcggcatcgatcacaaggccgtgttcttcacgtccggtgccgaagcg
gtggaaaacgcggtgaagatcgcccgcgctcacaccaatcgtccggcgatcatctcattc
cgaggcggctttcacggtcgcacgctgctcggcaccacgctgaccggcatgagccagcct
tacaagcagaacttcgggccgatggcgcctgaagtgtttcacaccccgtatccgaacgaa
taccgcggcgtcaccagcgaaatggcgttggccgcactgcatgaactgctggcgacccag
gttgcgcctgatcgcgtggcggccattctcatcgagcctgtgcagggcgacggtggtttt
ctgaccgctccggtcgagtttctgaaagcgctgcgggcgctgaccgagcagcacggcatc
gtgctgatcctggatgaaatccagaccggtttcggtcgtaccggcaagtggttcggtttc
gagcacgccggtatccagccggatctggtcaccgtcgcaaagagcctggcgggtggcatg
ccgttgtcgggcgtggtcggtcgcgccgagatcatggacgcaccgcttccgggcggtttg
ggcggcacctacggcggtaatgcgctgtcctgcgccgccgcgctggcggtcatcgacacc
tacgaacaggaaaatctgctggcgcgtggcgagcaactgggtcagcacctgcgtgcaggc
ctgctcaagctgaaagagcgttacagctgcatcggcgacgtgcgcggcaccggtttcatg
ctggccatggaaatgatcaaggatgacgcccaacgtagccccgacgctgacctcaactcg
aagatcatcgatcaggcacgcatcggcggactgctggtgatcaagtgcggcgtgtaccgc
aacgtgttgcgcttcctggcaccgctggtgaccaccgagcagcagattgacgaagcactg
accatcctcgacgccgcgctggcacgagtattgaaatccaactga
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