Panicum virgatum (switchgrass): 120641022
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Entry
120641022 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120641022 isoform X1
Organism
pvir
Panicum virgatum (switchgrass)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDBD
PHD
PHD_2
Acetyltransf_9
Acetyltransf_10
Acetyltransf_7
Motif
Other DBs
NCBI-GeneID:
120641022
NCBI-ProteinID:
XP_039772910
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All DBs
Position
7K:complement(32593045..32601603)
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AA seq
1443 aa
AA seq
DB search
MDGKDLFVEIGMKEEDIATMLFGKKVAELAEDAFDGSKEERQIFEGVFWITGLDGLTNHH
HEGPGHIADPGNPVTGSSTPSSSASNHKMAHCRIVESFTAGNLSSYRVFCFAADQQERRA
MPSPYAGPSELVVQWTPPPPDRVYTRRAVTRRSERARICSAMDLEGIDICNSGRQRDGRG
YGKLWNHLRLHAHLLMVDAGWKVEGKKRGGKSKVDHIYVAPDKLTQLFSLPRAWKCFGQW
LLTTTPCTDGNESNDYGKEWLNMHDFLYDLKNTLLCLQYEVQRPKQSLSFLHQWWLLDPF
MAVVCIDKKIRALKSGEALKAMNSSVTFLSHSERKLLSAKNESRPPGSCKKSLLPFFLSE
TDDQPQPDKEGSSSLNEQSSIFFSNNPREYEANQQSQRISETNGRGIRSTAHRIVMGLHD
ATTFLGSRQNCLSKKKKFPCIKSKVEQQAEDKSDPLYFPPALQHLANNVQIEDLNSHRYE
TVEVPYVANSAGTSEEMLLGENLLFSPEVDEMLLGITDDTNNEQHDAAVSSEPQVADKDA
KNGPSGASSLPLEKSDYMGSKEDCIDNGCPDAAVVSQCQMADKDAGDRPSGVLSLQSEKD
TDLGANSTSLEDPTKTKQLPSEASGNALMIAEPQVLFVSPHDGTLSFMNNSMNSQEMLSF
LNASHDTMGTQSSVYKASLIQGFLYLDSQGSPICWTVTNPEPHRQLICAADVEPSSKLSK
HCGEMNLEKEASAYEHKKILESGSSMKGKKRHDKIADIQDNVSRKKHKVNDAPLSNCISQ
YMDDVTDNPGDPVVLGEEKQIVTAIINEVPSNLEPKNKDDKDQDEQSIEHLKHSMSEEPL
KKDNKRQKNTRSRTCKFDDDDLLMTAVIHKLTARYRNCFHRRLTNKVGFRRLPRYRWERE
GEGSRKKLHGGTRTVLNKLLEMGIFAKVNILQYREPGGKNVLKDGNITSNGIRCRCCGTT
FTMSKFKCHAGLRQEIPSLNLSLGTGKSYSLCQLQAWSIEQKVRKERARDTMSLQGDQND
DICGSCGDAGELICCDNCPASYHQACLPCQDIPEGNWYCSSCLCDICGEVINSKELRTSV
PALECLQCESQYHAKCVAGKVLCNDKSGPDRFLCGRRCQQIYTTFHCRVGVPDHMDDGFS
CTILHNNGDQKVRTAAEIALMAECNMKLMIALSIMEECFLPILDPRTGIDIIPSILYNWR
SDFVHLDHKGFYTVVLENDDTIISVASIRCRCRLHGAIVAEMPLVATCTENRQQGMCRRL
MDYIEEMLKSLKVEMLLLSAIPHLVETWTSAFRFREIDGSDKKRLSKVRLASVPGTVLLK
KDLCERAGTHADDAVDGMGCLSFCARSPPSPAAAAVAEKQDWSPEVSAPVCVMQSLVDKL
SVVKIASRSATASPPPSDGGVCSERSSSGERSVNIAAAAGGRRPEDVVTVAFAGPGPKPV
WEK
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggacgggaaagacttgtttgtggagatagggatgaaggaggaggacattgccacaatg
ctatttgggaagaaagttgctgagctggcagaagacgcatttgatggttccaaggaagaa
agacagatctttgagggtgttttctggataacaggccttgatggattaactaatcatcat
catgaaggccctggacatattgcagatccaggcaacccagtgacagggtctagcacacca
tcaagttctgcctccaatcacaagatggcacactgtcgcatagttgagtccttcactgct
ggtaacttatcaagctaccgtgtcttctgttttgctgctgatcagcaggagcgccgagca
atgccttctccttatgctggaccttctgagcttgtggtgcagtggacgccgcctccccct
gatcgagtgtacacgcgtagggcggtgactcgcaggagcgagagagcaagaatttgcagt
gctatggatttggagggcattgatatttgcaattctggccgccagagagatggccgtggc
tatggaaagctttggaatcatctccgtctgcacgcacatcttctgatggtggatgctggg
tggaaggtcgagggcaagaaaaggggtggcaagagtaaggttgaccacatctatgtggcg
ccggacaaactgacacaactgttttctcttcccagggcatggaaatgctttggtcaatgg
ttgcttacgactacaccctgcactgacggaaatgagtcaaatgactatggaaaggaatgg
ttgaacatgcatgactttttgtatgatttgaagaacacactgctgtgcttacaatatgag
gtccagcgtccgaagcaatcattatctttcctccaccagtggtggctccttgaccctttc
atggctgtagtttgcattgataagaagattagagctctgaaaagtggagaggcactgaaa
gctatgaacagcagtgtaactttcctcagtcacagcgagcgtaaattgttgagtgccaag
aatgaaagcaggccacctgggtcatgcaaaaagagtcttctgccattttttctctctgaa
actgatgatcagcctcagcctgataaggaaggaagttcttcgctcaatgaacaatcttct
atatttttttcaaacaatccaagagaatatgaagccaatcaacaatcacagcgcatctca
gaaacaaatggacgaggcataagaagcacagctcatcgcatagtgatgggtctccatgat
gcaacaacttttcttggctcaagacaaaattgtttgagcaagaaaaagaaatttccgtgc
atcaagtctaaagtggagcagcaagctgaggataagtctgatccattgtacttcccacca
gcattacaacacctggctaacaatgttcaaatagaagatctgaattctcatcgctatgaa
accgtggaagttccctacgtggccaattctgcaggtacttcagaggagatgctcctagga
gagaacttactgttttcccctgaggttgacgagatgctacttggaattacagatgatacc
aacaatgaacagcatgatgctgcagtatcctctgagccccaagtggcagataaagatgcc
aagaatggaccttctggtgcatcatcactaccattagagaaaagtgattacatgggatct
aaagaagattgtattgacaatggctgtcctgatgctgcggttgtctctcaatgtcaaatg
gcagataaagatgcaggagatagaccttcaggtgtattatcgctacaatcagaaaaggat
acagacttgggagctaatagtacgagcttggaagatccaacaaaaacaaaacagttacca
tctgaagctagtggcaatgctttgatgatcgcagagccgcaagtgttgtttgtgtcgcct
catgatgggactctttcttttatgaacaatagtatgaacagccaagagatgttgagcttc
ctgaatgcttcccatgacaccatgggtactcagtcatcagtttataaggcaagcttgatt
cagggtttcttataccttgacagtcaaggttctccgatttgttggacagtaacaaaccca
gaacctcataggcagttgatctgtgctgctgatgtggagccaagctcgaagttgtcaaaa
cactgtggtgaaatgaatttggagaaagaggcatcagcatatgaacataaaaaaatattg
gaatctggctcaagtatgaaagggaaaaaaaggcatgataagattgcagatatccaagac
aatgtcagtagaaaaaaacataaagtgaatgatgctccattaagcaattgcataagtcag
tatatggatgatgtaactgacaaccctggtgatcctgtagttcttggtgaggaaaaacag
atagttacagcaatcattaatgaagttccttcgaatttagagcccaagaataaggatgac
aaggatcaagatgaacaaagcattgaacatttaaaacactccatgtcagaagaaccactc
aaaaaggataacaaaaggcaaaagaatacaaggtctcgcacatgcaagtttgatgatgac
gatcttctgatgacagctgtaatacataagttgactgcacgttacaggaattgttttcat
cgaaggctcacaaataaagttggtttcaggcgtcttccaagataccgctgggagagggaa
ggggaaggtagcaggaagaagttgcatggaggaacaagaacagtgttgaacaagttactt
gaaatgggtatttttgctaaagtgaacattcttcaatatcgagagcccggaggcaaaaat
gtgttaaaggatgggaatataactagtaatggcattcgatgccggtgctgtggcaccaca
tttacaatgtccaagtttaagtgtcatgcaggtctcaggcaagaaatcccatccctgaat
ctttccttgggtacaggtaaatcatacagtctttgtcagcttcaagcatggtctatagag
caaaaggtcaggaaagagcgtgcaagagatactatgtcacttcaaggagatcaaaatgat
gatatctgtggatcatgtggtgacgctggtgaactgatatgctgcgacaactgtcctgct
agttaccatcaagcttgcttgccttgtcaggatatcccagaaggcaactggtactgctct
agctgcctttgtgacatttgtggggaagtgatcaattcgaaggagctaaggacttcagtc
cctgctttagaatgtttacagtgtgaatctcaatatcatgcaaaatgcgtagctggcaag
gttttatgcaatgacaaaagtggacctgatagatttctttgtggaagaagatgccagcag
atttatacgacctttcattgtcgtgttggagtgcctgaccatatggatgatggtttttca
tgcaccattcttcataataatggtgatcaaaaggttcgtacagctgcggagattgctctc
atggctgaatgcaacatgaaactaatgattgctttgagcattatggaagaatgcttcctg
cctatcttagatccaaggacaggaatagacattattccttctatactatataactggagg
tctgattttgtacatttggatcacaagggattctatactgttgtcttggaaaatgatgac
accatcatatctgtggcatccatcagatgtcgctgcaggttacatggtgctattgtagca
gagatgcccctagtagctacttgtacagagaatcgtcaacagggaatgtgcaggcgcctt
atggattacattgaggagatgctgaaatccctgaaggtggagatgctacttctatcagca
ataccgcacctagtggagacatggacatcggcattcaggttcagagagatagacggctcg
gataagaagcggctgagtaaggtcaggctggcctcggttccgggcacagtcctgctgaag
aaagacctgtgtgaacgtgcaggcacccacgctgatgacgcagtggacggcatggggtgc
ctctcgttctgcgctcgctcgccgccgtctcctgccgccgccgctgtcgctgagaagcaa
gattggtctcctgaagtttctgcgccagtttgtgtaatgcaaagtctcgttgacaagcta
agtgttgtgaagatcgcttcgcgctctgcgaccgcgagccctcctccgtcggacggtggt
gtttgtagcgaacgaagtagctccggcgagcgttctgtaaatattgccgccgccgccggc
ggccgccggccggaggatgttgttaccgtggcctttgccgggccgggccctaaacctgta
tgggaaaagtag
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