Panicum virgatum (switchgrass): 120643927
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Entry
120643927 CDS
T07260
Name
(RefSeq) pectinesterase-like
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Motif
Other DBs
NCBI-GeneID:
120643927
NCBI-ProteinID:
XP_039776376
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Position
8K:11331865..11334504
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AA seq
575 aa
AA seq
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MHGLLWPWSRAIATVLLALSTAASLVAAGTQDEAAASRGGNVAVDDASRIAVSAAAAPAA
PWGANVSAICQSTPYPSACETALTSPASGSARDPFAASVQFAMSRAASARALARNVSGEA
SSSSPRRLRGAPPSGAADCAELLGISLDQLRDALAGDADGVTTWLSAALTNQGTCVDSLA
AEPVSAGRDAVRARVSALTQFVATALALHVNKLNADARGGPPPSGAPTATTPTTTFPSWV
TEHDRKLLVAPAGATSGGVTIDAVVALDGSGTHGSINEAIAAVTAANGGGGGSGGRKVIH
VKAGRYEESVSISSKQKNVMLMGDGKGKTVIAGHKSAADGYTTYATATVAAMGSGFIAKG
LTIVNTAGPGKGQAVALRVGGDLSVVYQCAIQAYQDTLYVHSNRQFYAEDDIAGTVDFIF
GNAAVVIQNCDIQARRPNPGQKDTVTAQGRTDPNQNTGISIHKCRITGAPDLGGTPVYLG
RPWQKYSRTVVMESFLDRSISPAGWLEWSGQFALNTLYYGEYSNTGFGAGTSKRVRWTGV
HTSLSRSDATRFTVANFIMGDSWLGGTGVTYTSGL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggctactatggccatggtcgcgcgccattgccacggtgctgctagctctctcg
acggcagcatctctcgtcgctgccggaacgcaagacgaagcggcagcatcgaggggcggc
aatgtggccgtcgacgacgcgtcgaggattgctgtctcggccgcggcggcgccggcggcg
ccatggggcgcgaacgtctcagccatctgccagtcgacgccgtacccgagcgcgtgcgag
acggcgctcacgtcgccggcgtcggggtcggcgagggacccgttcgcggcgtccgtgcag
ttcgcgatgtcccgggccgcgtcggcgcgcgcgctggcgcggaacgtctcgggggaggcg
tcgtcctcgtccccgcggcgcctccgcggcgcgccgccgtcgggcgcggcggactgtgcc
gagctgctcggcatcagcctagaccagctccgcgacgcgctcgccggcgatgcggacggg
gtcaccacgtggctcagcgccgcactgacgaaccagggcacctgcgtcgacagcctcgcc
gccgagccggtctcagcagggcgcgacgccgtgcgcgcgcgggtctccgcgctcacccag
ttcgtcgccacggcgctggccctgcacgtcaacaagctcaacgccgacgcccgcggcggc
ccaccgccgtccggagcgcccacggcgacgacaccaacgacgacgttcccgtcgtgggta
accgaacacgacaggaaactcctggtggcccccgcgggagcgacgagcggcggcgtcacc
attgacgcagtggtggcgctggacggcagcgggacgcacgggagcatcaacgaggcgatc
gcggccgtgacggcggcgaacggcggcggagggggcagcggcgggaggaaggtgatccac
gtgaaagccgggcggtacgaggagagcgtgagcatctcgagcaagcagaagaacgtgatg
ctgatgggcgacggcaaggggaagacggtgatcgccgggcacaagagcgccgccgacggc
tacaccacctacgccaccgccaccgtcgctgccatgggctccggcttcatcgccaagggc
ctcaccatcgtcaacaccgccggccccgggaagggccaggctgttgcgctgcgcgtcggc
ggcgacctctccgtcgtgtaccagtgtgccatccaggcataccaggacaccttgtacgtg
cactccaaccgccagttctacgcggaggacgacatcgccggcacggtggacttcatcttc
ggcaacgccgccgtggtcatccaaaactgtgacatccaagctcggaggccaaacccgggg
cagaaggacacggtcacggcccagggccggaccgatccgaaccagaacaccgggatttcc
atccacaagtgcaggatcaccggggcaccagacctcggcggcacgccagtgtatctgggt
cgtccgtggcagaaatactcacggacggtcgtgatggagagcttcctcgatcgttctatc
tctccggcgggttggctagagtggtcgggccagtttgccctaaacacgctatactacggt
gagtacagtaacactgggtttggtgccgggacaagtaagcgcgtgagatggactggggtg
cacacgtcactgtccagatcagatgccacaaggtttaccgtggccaattttatcatggga
gactcgtggttgggtggcactggagtgacctatacgtctggactgtga
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