Panicum virgatum (switchgrass): 120648985
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Entry
120648985 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120648985 isoform X1
Organism
pvir
Panicum virgatum (switchgrass)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kinesin
TAP42
RabGAP-TBC
Microtub_bd
ubiquitin
Motif
Other DBs
NCBI-GeneID:
120648985
NCBI-ProteinID:
XP_039781535
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Position
9K:163259..191966
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AA seq
1369 aa
AA seq
DB search
MMRWGNSGQAADSFYQVRPDCSQNVPSTKFKIKAGKTLSVRKWHAAFTREGCLDIASVLS
RIQRGGVHPAIRGEVWEFLLGCYDPGSTFDERDQIRHRRRMQYARWKEECREMDSHVSSG
KIITAPIITEDGFPINDPLVLLEATQGTSSSSSSSSTTRVEVSDSTNRVTDRQIVDWKLT
LHQIGSCMIGLDVLRTDRSMVFYENKENLQKLWDILAVYAWIDKEVGYCQGMSDLCSPMI
VLLNDEADAFWCFERLMRRLRGNFRCTQQSVGVENQLQHLASIIQVLDPKLHDHLETLGG
GDYLFAFRMFMVLFRRELSFGDSLYLWEVPYYLAEMTEKIAQEDRIPVLKASQDHLKEFI
ALCEVLELIPEDELELSRQKQPDTMANRRTQKVARFKRQKAAETKLQEIRERKERRGRSL
RAAALSAPIETGEEDDLEDDGEEEREAWLATISLALCKAFDLLDMLKKEEEMLLAVKERK
AKDGNAFAREMLDEQTKKAEAWHHNAANRVAYSKPADPITCATFAQDVIEGRASVSQAHE
HKHQPLIFGPANLVGGGLTSERERMAAQVFQPSCRMPTMSIEEAGLREMKMMEKWQDRAT
KTMKEANSAWHNDGTSSAQEDEDAINFALLPDEALLASQLEGDRRSSIEKAYNAALREAE
KIHTGRRTKPTARWPKKVMEVFQMIYMATCMTKEVRFKRGEENWVDDPIVHDMALELFAR
TQRAYSGQQLHNKWKNMKLDKILKEEDQKLDIEGPNLPPPASTPPPQHLGFTATANGMEI
DTSQPPIVFKSQLYTLTGVPPECQKIIGKGGTLEDNGNWSDLGVKDGQKLMMIGTNAAIT
KVLQEEVDTLVIAAANNLSTRELSKSLQLPAIEFLLEENGHKSDLEILRKKMEHLDIENK
KDKDELQQEIAILKKRQMGYINEVDLLKKQLYTAEALRSDMHNQLMELKGSIRVFCRVRP
ILDKSSSEDGAIYCLEKGQFVGRRVYLETSSGAIKAFTCDRVFPPGVSQNDIFVEISGLV
KSAMDGKKVCIFAYGQTGSGKTFTMLGDDGDDVKGVIPRAVEEIFETIHIRESLGLAHHT
VKIDMSEIYNEEVRNLSSMASNDNVVKTKTQALGALKEALSKRAVAKTSRNERSSRSHFI
FRLSIYSYNEKMEMCEGALNIIDLAGSEAADSDATKEVQAEAKAINKSLLYLGTTIGQIE
RGAEFINFRNSQLTRELQSSLGKNCKVLMFVNVASEKTYAKETAATFEFAAQIKSSIKME
TLDSKKTQLLKEKEFEFKSPGMSSVRPQKGAFGLNPPFSINIRRTTKQQPSCTKKFDVAP
TCKKRCIITIEKQPFGHTLDQHLNAPVANGREVEIGSFGPLQSMYLAFV
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgatgagatgggggaacagtgggcaggccgcggattccttctaccaggtccgcccggat
tgcagccaaaacgtccccagcaccaagttcaagatcaaggccggcaagacattgagcgtg
cggaaatggcacgctgcgtttacgcgtgaaggctgcttggacatcgcttctgttctaagc
cgcatacagagagggggtgtccaccctgccatcaggggggaggtttgggagttcttgctt
ggctgctatgatcctgggagcaccttcgatgagcgggaccagattaggcacaggagaagg
atgcagtatgctagatggaaggaagagtgccgagagatggattctcacgttagcagtggt
aaaattatcactgccccaatcatcactgaggatggattccctatcaatgatccattggtt
ttactcgaggctacgcaaggtacttccagcagcagcagcagcagcagcaccaccagagtt
gaggtcagcgactccacgaaccgtgtcactgataggcaaatcgttgactggaagcttacg
ctgcatcagatcggaagctgcatgataggccttgatgttctacgcactgaccgctccatg
gtattttatgagaacaaagaaaatcttcaaaagttgtgggatattctagctgtatatgca
tggattgacaaagaagtcggttattgccaaggaatgagtgatttatgttcgcccatgata
gtactgctgaacgatgaagcagatgcattttggtgctttgagaggttgatgcgtaggctg
agagggaatttcagatgcacacagcagtctgttggagtggaaaaccagcttcagcatctt
gcttctatcattcaggtgctcgacccgaagttacatgaccacctagaaacacttggtggg
ggtgactatctctttgcatttcgcatgttcatggtattgttccggcgagaactatcgttt
ggggactccttgtacctttgggaggttccctattaccttgcggaaatgaccgaaaagata
gcacaggaggatcggatcccagttcttaaggcgtcacaagaccacttgaaggagttcatt
gctctatgtgaagtactagagctaattccagaggatgagctagaattgtctaggcagaag
cagcctgatactatggcaaacagaagaacgcagaaggttgcccggttcaaacgtcaaaag
gctgctgaaacgaagctccaagagatcagagagagaaaagaaaggcgtggacgctcactg
agagcagctgctttatctgccccaattgaaactggagaggaagatgacttggaggatgat
ggggaggaagaaagagaggcttggttagctaccatctccttggctctctgcaaggcgttt
gatcttctcgacatgctaaagaaggaagaagaaatgcttctagctgtaaaggaaaggaag
gcaaaggacgggaatgcatttgctcgtgaaatgcttgatgaacagacaaagaaggctgaa
gcatggcaccataatgctgccaatcgtgtggcatattccaaaccagctgatccaatcact
tgcgcaacatttgctcaagatgtcattgaaggtagagcaagcgtttcacaagctcacgag
cacaaacaccagcccctgatatttggacctgcaaatcttgttggtggtggtctaaccagt
gaaagggaaagaatggcagcacaagtttttcagcctagttgcaggatgccaacaatgagc
atcgaagaagctggtttgcgcgagatgaaaatgatggagaagtggcaagacagggctacc
aagactatgaaagaagcaaactccgcgtggcacaatgatggcaccagctcggcccaagag
gacgaggacgccatcaattttgcgctactccctgatgaggctctcttggcatctcagcta
gaaggagaccggagatcctctattgagaaggcctataatgcggcactccgcgaggctgaa
aaaatacacacaggaagaagaacaaaacccaccgcacgttggccgaagaaagtgatggaa
gtctttcagatgatctatatggcaacatgtatgacaaaagaagtgcgctttaaaagaggc
gaggagaattgggttgatgatcccatagttcacgatatggcgcttgagctctttgcgaga
acgcaaagagcatatagcggccaacaattgcacaacaaatggaaaaatatgaaactagac
aagatactcaaagaagaagaccaaaaattggacattgagggtccgaaccttcctcctcct
gcaagtactccacctccacagcacttaggattcacagccacggcaaatggcatggagatt
gacactagccagccaccaattgttttcaagagtcagctgtacacacttacgggggttcca
cctgaatgtcaaaagatcattggcaagggtggaacattggaggacaatgggaattggtct
gatttgggggtgaaagatggtcaaaagttgatgatgataggcacgaatgctgcaatcacc
aaagtactacaagaggaagtggataccttggtgattgcagctgcaaataatctatccaca
agggagttgagcaaatcactccagttaccagcaatagagtttttgctggaggagaatggt
cacaagagtgaccttgaaatcttaagaaaaaagatggagcatctagatattgaaaacaag
aaggataaagatgaacttcagcaagaaattgcaattttaaagaaaaggcagatgggctac
ataaatgaagttgatttgctaaaaaagcaactttacacggcggaagccttacgcagcgat
atgcataaccagctaatggaattaaagggaagcatacgggtcttctgccgtgtgcgaccc
attcttgacaagagcagtagtgaagatggtgcaatctattgcttggagaagggacagttt
gttggccgccgtgtttatctggaaacatcatcaggggctataaaagcttttacatgcgat
cgagtgttccctcctggagtttcacaaaatgatatctttgttgaaatatcaggattagtg
aagagtgcaatggatggcaagaaggtttgcatatttgcttatgggcagacaggctctggt
aaaacatttaccatgttaggtgatgatggagatgatgtaaagggggtgatcccacgcgct
gtggaggaaatttttgagaccattcatattcgagaatctttgggcctagctcaccataca
gtaaagattgatatgagtgaaatttataacgaagaagtgcgcaatctgagctcaatggct
tcaaatgataacgtcgttaaaacaaaaacccaggcgcttggagctttaaaggaagcattg
agcaagagggctgttgctaagacttcgcgcaatgaaagatcatctcgaagccattttatt
ttcaggttatccatatattcttataacgagaaaatggaaatgtgcgaaggagctcttaac
atcattgatttagccggtagtgaagcggcggacagtgatgctactaaagaagtacaagcc
gaggccaaggctataaataaaagtttgctttatttagggacaactattggtcaaattgaa
agaggagctgaatttattaatttcagaaactcccaacttacaagagaactacagagttct
cttggaaagaattgtaaggtgttgatgtttgttaatgtggcttcggagaaaacatatgct
aaagaaacagctgcaacatttgagttcgcggctcaaattaagtcctcgattaagatggag
acattggattctaagaaaacccagctattaaaagaaaaagaatttgaattcaaatctcca
gggatgtcaagtgtaaggccacaaaaaggtgcatttgggctaaaccctccattctctata
aacattaggaggaccaccaagcaacaaccttcatgtacaaagaagtttgatgttgcgcct
acatgtaaaaaaaggtgtataataacgattgagaaacaacctttcgggcacactttggac
caacatttaaatgcccccgttgcaaatggaagagaggtagaaatcgggtcttttggacct
ctgcaatcaatgtatcttgcatttgtgtag
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