Panicum virgatum (switchgrass): 120656508
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Entry
120656508 CDS
T07260
Name
(RefSeq) phenylalanine ammonia-lyase-like
KO
K10775
phenylalanine ammonia-lyase [EC:
4.3.1.24
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00360
Phenylalanine metabolism
pvir00940
Phenylpropanoid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
pvir_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
120656508
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
120656508
Enzymes [BR:
pvir01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.24 phenylalanine ammonia-lyase
120656508
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Gene cluster
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Motif
Pfam:
Lyase_aromatic
Motif
Other DBs
NCBI-GeneID:
120656508
NCBI-ProteinID:
XP_039790547
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Position
1N:complement(51290310..51292775)
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AA seq
713 aa
AA seq
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MACEKSNVATNGDGLCMATPRADPLNWGKAAEELMGSHLDEVKRMVAEYRQPLVKIEGAS
LRIAQVAAVANGAGEARVELDESARDRVKASSDWVMNSMMNGTDSYGVTTGFGATSHRRT
KEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEILEAIV
KLLNANVTPCLPLRGTVTASGDLVPLSYIAGLVTGRENSVAVAPDGTKVNAAEAFKIAGI
QGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAILAEVLSAVFCEIMNGKPEFTDH
LTHKLKHHPGQIEAAAIMEHILEGSSYMKLAKKLGELDPLMKPKQDRYALRTSPQWLGPQ
IEVIRAATKSIEREINSVNDNPLIDVARSKALHGGNFQGTPIGVSMDNTRLALAAIGKLM
FAQFSELVNDYYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSA
EQHNQDVNSLGLISSRKTAEAIEILKLMSSTFLIALCQAVDLRHIEENVKSAVKSCVMTV
AKKTLSTNATGGLHVARFCEKDLLQEIEREAVFAYADDPCSANYPLMKKLRNVLVERALA
NGAAEFSAETSVFAKVAQFEEELRAALPKAVEAARAAVENGTAAIPNRIAECRSYPLYRF
VREELGAVYLTGEKTRSPGEELNKVLVAINQGKHIDPLLECLKEWNGEPLPIC
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcgagaagagcaatgtcgctaccaatggcgacggcctgtgcatggcgacgccg
cgcgccgacccactcaactgggggaaggccgcggaggagctcatgggcagccacctcgac
gaggtgaagaggatggtggcggagtaccgccagccgctggtgaagatcgagggcgccagc
ctccggatcgcgcaggtcgccgccgtggccaacggcgccggcgaggcccgcgtcgagctc
gacgagtcggctcgcgaccgcgtcaaggccagcagcgactgggtcatgaacagcatgatg
aacggcaccgacagctacggcgtcaccaccgggttcggcgcaacctcccaccgccgcacc
aaggagggcggtgcgctccagagggagctcatccggttcctcaacgccggcgctttcggc
accggcaccgacggccacgtcctgccggccgaggcgacgcgggcggccatgctcgtccgc
atcaacaccctcctccaggggtactccggcatccgcttcgagatcctcgaggcgatcgtc
aagctgctcaatgccaatgtcacgccgtgcctgccgctccggggcacggtcaccgcgtcc
ggcgacctcgtcccgctgtcctacattgccggcctcgtcaccgggcgcgagaactctgtg
gcggtggccccagatggcacgaaggtgaacgcggctgaggcgttcaagattgccggcatc
cagggcggcttcttcgagttgcagcccaaggaaggcctcgccatggtcaacggcaccgcc
gtgggctcaggacttgcctccaccgtgctcttcgaggcgaacattctcgctatccttgcc
gaggtcctgtccgccgtgttctgcgagatcatgaacggcaagccggagttcaccgaccac
ctgacccacaagctgaagcaccacccgggacagatcgaggctgccgccatcatggagcac
atcttggagggcagctcctacatgaagcttgccaagaagctcggcgagctcgatccactg
atgaagccgaagcaggaccggtacgcgctccgcacgtcgccgcaatggcttggcccccaa
attgaggttatccgtgccgcgaccaagtccattgagcgcgagatcaactccgtcaacgac
aacccgctcatcgacgtcgcccgcagcaaggcgcttcacggtggcaacttccagggcacg
cccatcggcgtgtccatggacaatacccgtctcgccctcgccgccatcggcaagctcatg
tttgctcagttctcagagctcgtcaacgactactacaacaacggcctgccctccaacctg
tccggcgggcgcaacccaagcttggactacgggttcaagggcgccgagatcgccatggcg
tcgtactgctcagagctgcagttcctgggcaacccggtgaccaaccacgtccagagcgcg
gagcagcacaaccaggacgtgaactcgcttggcctcatctcctccaggaagaccgccgag
gccatcgagatcctgaagctcatgtcctcgacgttcctgatcgccctgtgccaggccgtc
gacctgcgccacatcgaggagaacgtcaagagcgccgtcaagagctgcgtgatgacggtg
gcgaagaagaccctgagcaccaacgccaccggtggcctccacgtcgcccgcttctgcgag
aaggacctgctccaggagatcgagcgcgaggcggtgttcgcctacgccgacgacccgtgc
agcgccaactacccgctgatgaagaagctgcgcaacgtgctcgtggagcgcgccctcgcc
aacggcgcggccgagttcagcgcggagacatccgtgttcgccaaggtcgcccagttcgag
gaggagctgcgtgcggcgctgcccaaggcggtggaggccgcacgggcggccgtcgagaac
ggcacggcggcgataccgaacaggatcgccgagtgccgctcgtacccgctctaccggttc
gtgcgcgaggagctcggtgcggtgtacctgaccggcgagaagacgcggtctcccggcgag
gagctgaacaaggtgctcgtcgccatcaaccagggcaagcacattgaccctctgctcgag
tgcctcaaggagtggaacggcgagcccctgcccatctgctga
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