Panicum virgatum (switchgrass): 120657116
Help
Entry
120657116 CDS
T07260
Name
(RefSeq) homeobox-leucine zipper protein HOX16-like isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120657116
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
120657116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
HALZ
Homeobox_KN
DUF4795
YabA
Motif
Other DBs
NCBI-GeneID:
120657116
NCBI-ProteinID:
XP_039791306
LinkDB
All DBs
Position
1N:59538098..59540300
Genome browser
AA seq
328 aa
AA seq
DB search
MESGRLIFSATGSGAGQMLFLDCGAGGVPGGGLFHRGGRPMLGLEEGRGVKRPFFTSPDE
LLEEEYYDEQLPEKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQ
NRRARWKTKQLERDFDRLKASFDALRADHDLLLQDNHRLRSQVASLTEKLQEKEVTEGGV
SADADAAALPVDAKVPLADDVEEPAAEAFEEQQVKSEDRLSTGSGGSAVVDTDALLCGRF
AAAVDSSVESYFPGGEDHYHDCGMGPVNHCPGGIQSDDDGAGSDEGCSYYPEEEAAAAAV
AAAFFAGHAHPHAEDDEDAGQIGWWMWN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggagtccggccggctcatcttcagcgccacgggttccggcgccgggcagatgctcttc
ctggactgcggcgcgggcggcgtccccggcggcggcttgttccatcgaggtgggagaccg
atgctcggcctggaagaagggcgcggcgtaaagcggcccttcttcacctcccccgacgag
ctcctcgaggaggagtactacgacgagcagctgccggagaagaagcgccgcctcaccccg
gagcaggtgcatctgctggagaggagcttcgaggaggagaacaagctggagccggagcgc
aagacggagctggcccgcaagctggggctgcagcctcgccaggtggccgtctggttccag
aaccgccgcgcccgctggaagaccaagcagctcgagcgcgacttcgaccgcctcaaggcc
tccttcgacgccctccgcgccgaccacgacctcctcctccaggacaaccaccgcctccgc
tcacaggtggcgtcgttgaccgagaagctgcaagagaaggaggtgacggagggcggcgtc
agcgccgacgccgacgccgcggcgctgccggtggatgccaaggttcccttggccgatgac
gtcgaggagccggccgcggaggcgttcgaggagcagcaggtcaagtccgaggacaggctg
agcacgggcagcggcgggagcgcggtggtggacacggacgcgctgctgtgcggccggttc
gccgccgcagtcgacagcagcgtcgagtcctacttccccggcggcgaggaccactaccac
gactgcgggatgggccccgtcaaccactgcccgggagggattcagtcggatgacgacggc
gcgggcagcgatgagggatgcagctactatcccgaagaagaagccgccgccgccgccgtt
gccgccgcgttcttcgccggacacgcccacccccacgccgaagacgacgaggacgccggg
cagatcggctggtggatgtggaactag
DBGET
integrated database retrieval system
