Panicum virgatum (switchgrass): 120659523
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Entry
120659523 CDS
T07260
Name
(RefSeq) tryptophan synthase alpha chain-like
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00260
Glycine, serine and threonine metabolism
pvir00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120659523
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
120659523
Enzymes [BR:
pvir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
120659523
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GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
TMP-TENI
BtpA
ThiG
Motif
Other DBs
NCBI-GeneID:
120659523
NCBI-ProteinID:
XP_039793635
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Position
2N:complement(6322119..6325613)
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AA seq
324 aa
AA seq
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MAFALKAASTAGSASLAAAGPRRAAAPAAGRVSFRGASAAGPVVAVRAAAAAASAVAHDR
RSISGTFAELREQGKTALIPFITAGDPDLATTAKALKILDACGSDVIELGVPYSDPLADG
PVIQASATRALAKGTTFEDVISMVKEVIPELSCPVSLFTYYNPILKRGIPNFMTIVKEAG
LRGLVVPDVPLEETDFLRSEAAKNNLELVLLTTPTTPNERMEKIAQASEGFIYLVSTVGV
TGTRANVSGKVQSLLQDIKKVTEKPVAVGFGVSTAEHVKQIAGWGADGVIVGSAMVRLLG
ESASPEEGLKKLEELAKNLKAALE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgcgctcaaggccgcctccaccgccgggtcggcgtcgctcgccgccgcgggg
cccaggcgggccgccgcgccggccgcggggagggtctcgttccggggcgcgtcggccgcc
gggcccgtggtcgccgtcagggcggccgcggcggcggcctccgccgtggcgcatgacagg
cgcagcatctccgggacgtttgccgagctcagggagcaggggaagactgccctcatcccc
ttcatcactgctggtgaccctgacctggctaccacagcgaaggcactcaagatccttgac
gcgtgtggttcggacgtgattgaattgggtgtgccttactcagatccgttggctgatggc
cctgttattcaggcctctgcaacacgtgcgctagcaaaaggcaccacgtttgaggatgtc
atctccatggttaaggaggtgatacctgagctgtcctgccctgtatcacttttcacatat
tataacccgattctgaagcgcggaatcccaaacttcatgactattgttaaggaagctggt
ttacgcggccttgtggtacctgatgttcctttggaagagacagattttttgaggagcgag
gctgctaagaacaaccttgagctggtgctactcacaacaccaactacaccaaatgaaaga
atggagaaaatcgcacaggcttcagaaggatttatttatcttgtaagcactgttggagtt
actggtacacgtgcaaatgtaagcggcaaggtgcaatctcttcttcaggatatcaagaag
gtcactgaaaaacccgtggctgttggctttggtgtgtcaactgctgagcatgtgaagcag
atcgcaggttggggcgcagatggtgtgattgttggtagcgcaatggttaggctattgggg
gaatctgcttctcctgaagaaggattgaagaagctagaagagttagccaagaacctgaag
gccgcattggaatga
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