Panicum virgatum (switchgrass): 120661171
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Entry
120661171 CDS
T07260
Name
(RefSeq) ribulose-phosphate 3-epimerase, cytoplasmic isoform
KO
K01783
ribulose-phosphate 3-epimerase [EC:
5.1.3.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00030
Pentose phosphate pathway
pvir00040
Pentose and glucuronate interconversions
pvir00710
Carbon fixation in photosynthetic organisms
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
pvir_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
pvir_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pvir_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
120661171
00040 Pentose and glucuronate interconversions
120661171
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
120661171
Enzymes [BR:
pvir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.1 ribulose-phosphate 3-epimerase
120661171
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Motif
Pfam:
Ribul_P_3_epim
OMPdecase
Motif
Other DBs
NCBI-GeneID:
120661171
NCBI-ProteinID:
XP_039795837
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Position
2N:complement(52467664..52471510)
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AA seq
225 aa
AA seq
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MAAAKIAPSMLSSDFANLATEAERMLRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT
KAYLDCHLMVTNPSDYVEPLGKAGASGFTFHIEVTRDNWQELIQSIKSKGMRPGVSLRPG
TPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMDKVRTLRNKYPSLDIEVDGGLG
PSTIDVAASAGANCIVAGSSIFGAADPGEVISVLRKSVEGSQNKN
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgaagatagcaccgtcgatgctctcatcggacttcgccaatctcgccacg
gaggccgagcgcatgctccgcctcggcgccgactggctccacatggacatcatggatggg
cactttgttcctaatctgactattggggctccagtgatccagagcttgaggaaacatacc
aaagcatatttggactgccatcttatggtcacaaacccttcagattatgtagaaccattg
ggaaaggctggtgcctcaggattcacattccatatagaagtaaccagagacaactggcaa
gagctcatccaaagcattaaatcgaagggtatgcggcctggtgtatcattgaggccaggt
actccggtggaggaagtttttcccctggtggaagcggaaaatccggtagaattagttctt
gtgatgacagttgagcctggtttcggtggtcagaaattcatgccagaaatgatggataag
gtgcgtacactgagaaataagtatccttcccttgacatagaggtcgatgggggtctaggt
ccttcaaccatcgatgtggccgcatctgctggcgctaattgcattgtggctggaagctcc
atatttggcgctgctgaccctggagaggttatatcggtgcttaggaagagtgtcgagggc
tctcagaacaaaaactga
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