Panicum virgatum (switchgrass): 120670484
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Entry
120670484 CDS
T07260
Name
(RefSeq) probable transcriptional regulator SLK2 isoform X1
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
LIM_bind
Motif
Other DBs
NCBI-GeneID:
120670484
NCBI-ProteinID:
XP_039806516
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Position
4N:complement(1516319..1523690)
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AA seq
907 aa
AA seq
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MNGAHPWTSVSGSACSNLGLVAREMNGSVSISTTNSSGPSIGVSSLVTDTNSSLSGGAQL
QPSNSMNCDSFMRVPASPMSFSSNNTSGSSVIDGSIMQQSSPQEQVQKRRTSSVSSLAVI
DAGGALHAQKKSRIDASQGDIMQQQLIQQLVHGQNSLHFQGQQNPQLQALIQQNKLALLQ
QQQQQQQQQQQHLLQPFSQIQQPQVGIPRQPQLRPPLAQPGMQLGGPVRTPVENGICSRR
IKQYLFHKRQHPENNSITYWRKLVEEYFAPRSRERWCVSSYENRGNSSAAAPQKALDSWR
CDICNTHGGKGYDATYEVLPRLFQIRFDHGVIDECLFFDSPNEFRLSNGQMVLEYAKVVQ
KSVYEHLHVIHEGHLRIIFTPELKIMSWEFCSRSHEEYTTRKTIAPQVNNLLQVAQNYQT
AVSESGPAGISNNDAQTICNMFVAASRQLAKNLEHHTLNEHGLSKRYVRCLQISEVVNHM
KDLIEFSHKNNLGPKESLNIYSKTIAKFQNMPRQLMTAASLANNQSNTKVIGIQQETSAP
VNNQTPSVGAIGNNTLQTATTLNSYQNLLRSSSANQILLQHEASSIFKGSAGTHNGIQLE
AVRSFHGPGQAQLAQFQHPASFQQPTPQQNNLHGFGASPQYQQHVFNQLLQEVKKNNNCA
FAQQPPPDAPSASSGLTSGAATPNVAASGEQALGANPQYQQHVLNQLLQEVKKNNNRAFA
QQPPPDAPSASSGLASGAATPNVAASGEQVLGASPQYQQHVLNQLLQEVKKNNNRAFAQQ
PLPDAPSASSGLTSGAATPNVAASREQVQHINNHNSNHNSAVKGAPPAGTGPSYVINNNT
ASIAPSRNNSFKSASSNPRASATGGNAVNQKVDESFHELEDLDHLITSELLESGLFGAGQ
GGDVLPW
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagcccatccctggacctctgtgtctgggagtgcatgctctaaccttggactt
gttgccagggagatgaatggtagtgtttcaattagtactacaaattcatctgggccaagc
attggagttagctctttggtgactgacaccaactcgtcactttctggaggtgcccagtta
cagccaagtaatagcatgaattgtgattcattcatgcgtgttcctgcctccccgatgtca
ttttcatccaataacacctctggctcttcagtcattgatggttccatcatgcagcaaagt
tcaccccaagagcaggtccagaaacggaggacttcaagtgtatcatcactagctgtgatt
gatgctggtggtgcattgcatgctcagaagaaatcaaggattgatgctagccagggtgat
atcatgcaacaacagctgattcagcagctggtccatggtcagaattctcttcatttccaa
gggcaacagaacccacagcttcaagctttgatccagcagaataaactggccctgcttcag
cagcagcagcagcagcagcagcagcagcagcagcatctattgcaaccattttcccagata
caacaaccccaagttggtattcctcgacagcctcaacttaggccaccactggcacagcct
ggaatgcagttaggtggtcctgttaggactcctgttgagaatggaatttgttctcgcagg
ataaaacagtatttatttcacaagcgtcagcacccagagaataactctataacatactgg
aggaagcttgttgaggagtactttgcaccgcgatcaagagaaagatggtgtgtctcttct
tatgaaaatagagggaattcctcagcagctgctccacagaaagctctggattcatggcga
tgtgacatttgcaatacacatggaggaaaaggatatgatgctacttatgaagtacttcct
aggctcttccaaattagatttgaccacggtgttatcgatgaatgcctattctttgattcg
cccaatgaattccggttgtctaatggacaaatggtgctggagtatgcaaaagttgttcaa
aaaagtgtttatgaacatctacatgttatacatgaggggcatctgagaatcattttcaca
ccagaactgaagataatgtcctgggaattctgttcacgaagccatgaagagtataccaca
cgcaagactatagcaccgcaggttaataatctgctgcaagttgcccagaactaccaaact
gctgtcagtgaaagtggaccagctgggatatcaaacaatgacgcacaaaccatttgcaac
atgtttgtcgctgcatcacgacaattagcaaaaaatctagagcatcacaccttaaatgaa
catgggctttccaaaagatatgtacgctgcctgcagatatctgaggtggtgaatcacatg
aaggacttgattgagttcagccacaagaacaatcttggtcctaaagagagcctgaatatt
tattctaaaactattgcaaagtttcagaatatgccaagacagctcatgactgctgctagc
cttgccaataaccagagcaacaccaaagtaattgggatccagcaagagacaagtgctcct
gtgaacaaccagactcctagtgttggagccattggcaataacactctacagactgccaca
acgctaaacagttatcagaacctactcagaagctccagcgcaaatcagattttgcttcag
catgaggcatcgagcatcttcaaaggctcagcaggaacgcacaacgggatacagctggaa
gcggtcagatccttccatggacctggccaggcgcagcttgcgcaattccaacaccctgca
tcatttcagcagcctacaccgcagcaaaacaatctccatggctttggtgctagcccacaa
taccagcaacatgtgtttaatcaattacttcaggaagttaagaagaataataactgtgct
tttgcacagcaaccacctccagatgcacctagtgcaagcagtggtctcacatcaggagct
gctacccccaatgttgctgcttctggggagcaggcgcttggtgctaacccacaataccag
cagcatgtgcttaatcaattacttcaggaagttaagaagaataacaaccgtgcttttgca
cagcaaccacctccagacgcacctagtgcaagcagtggtctcgcatcaggagctgctacc
cccaatgttgctgcttctggggagcaggtgcttggtgctagcccacaataccagcagcat
gtgcttaatcaattacttcaggaagttaagaagaataacaatcgtgcttttgcacagcaa
ccacttccagatgcacctagtgcaagcagtggtctcacatcaggagctgctacgcccaat
gttgctgcttctcgggagcaggtgcagcacatcaataatcataacagtaaccacaacagt
gcagtaaagggtgctcctccagctggtactgggcctagttatgtgatcaacaataacaca
gccagcattgcccctagcagaaacaacagtttcaagtcagcgagcagtaatccacgtgct
tctgctactggaggaaacgctgtgaatcaaaaggttgatgaatccttccatgaactggag
gaccttgaccacctgattactagcgaactgttggaaagtgggctgttcggtgcagggcag
ggtggtgacgtgttgccgtggtaa
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