Panicum virgatum (switchgrass): 120670681
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Entry
120670681 CDS
T07260
Name
(RefSeq) phosphoenolpyruvate carboxylase 1-like isoform X1
KO
K01595
phosphoenolpyruvate carboxylase [EC:
4.1.1.31
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00620
Pyruvate metabolism
pvir00710
Carbon fixation in photosynthetic organisms
pvir01100
Metabolic pathways
pvir01200
Carbon metabolism
Module
pvir_M00168
CAM (Crassulacean acid metabolism), dark
pvir_M00170
C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type
pvir_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
pvir_M00172
C4-dicarboxylic acid cycle, NADP - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
120670681
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
120670681
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.31 phosphoenolpyruvate carboxylase
120670681
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PEPcase
PEPcase_2
YaeQ
WbqC
Motif
Other DBs
NCBI-GeneID:
120670681
NCBI-ProteinID:
XP_039806768
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All DBs
Position
4N:34747946..34753303
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AA seq
991 aa
AA seq
DB search
MASSERHHSIDAQLRQLAPGKVSEDDKLVEYDVLLMERFLDILQDLHGPAIREFVQDCYE
LSAEYEGDRNAARLKELGSRLAALAPADAILVAGSIQHMLNLANLAEELQIANRRRNKLK
SGDFADEGSATTESNIDETIKRLVDLGKSKEEVFEALKNQSVDLVLTAHPTQSVRRSLLQ
KHARIRNCINQLNAKDVTEDEKKELDEALSREIQAAFRTDEIRRAQPTPQDEMRYGMSYI
HETIWKGVPKFLRRLDTALKNIGIDERLPYNVPLIQFCSWMGGDRDGTYDPSPVSVFRLL
LMSKYVLISGDFLVCVGNPRVTPEVTRDVCYLSRMMAANLYFYGLEELMFELSMWRCNDE
LRARAQEIHSAPKKAAKHYIEFWKQIPLSEPYRVVLGDVRDKLYNTRERARQLLTNEFSD
IPEELTFSNVQQFLEPLELCYKSLCESGDKTIADGRLLDFLRQVSAFGLSLVKLDIRQES
ERHTDVIDAITTHIGIGSYRSWPEEKRQEWLLSELQGKRPLLAPDMPQTEEIADVLGCFR
VLAELPRDSFGPYIISMATAPSDVLAVELLQRECHIRDPLPVVPLFERLADLQNGPASME
RLFSADWYLKRINGKQQVMIGYSDSGKDAGRLSAAWQLYRAQEELAQVAKKYNVKLTMFH
GRGGTVGRGGGPSHLAILSQPPDTINGSIRVTIQGEVIEHSFGEEHLCFRTLERFTAATL
EHGMHPPVSPKPEWRKLMDEMAVVATDEYRSIVVREPRFVEYFRSATPETEYGKMNIGSR
PAKRKPQGGITSLRAIPWIFSWTQTRFHLPVWLGVGAAFQSAIKKDSKNIQKLKEMYKEW
PFFRVTIDLLEMVFAKGDPSIAALYDELLVADELKPLGEQLRNKYLETQQLLLQIAGHKE
ILEGDPYLKQGLRLRNPYITTLNVFQAYTLKLMRDPSFKVEKQPPMSKEFSDEKKPAGLV
ELNPASEYPPGLEDTLILTMKGIAAGMQNTG
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccgagcgccaccactccatcgacgcgcagctccggcagctggcccccggc
aaggtctccgaggatgacaaactcgtcgagtacgacgtcctcctcatggagcgcttcctc
gacatcctccaggacctccacggccccgccatccgcgaattcgtccaggactgctacgag
ctgtcggcggagtacgagggcgaccgcaacgccgcgcgcctcaaggagctcgggtccagg
ctcgccgcgctggcccccgccgacgccatcctcgtcgcgggctccatccagcacatgctc
aacctcgccaacctcgccgaggagctgcagatcgccaaccgccgccggaacaagctcaag
agcggggacttcgccgacgagggctccgccaccaccgagtccaacatcgacgagaccatc
aagcgcctcgtcgacctcggcaagtccaaggaggaggtgttcgaggcgctcaagaaccag
tccgtcgacctcgtcctcaccgcgcaccccacgcagtccgtccggaggtcgctcctccag
aagcacgccaggatccggaactgcatcaatcagctgaatgccaaggacgtcacggaggac
gaaaagaaggagctcgacgaggctctttccagggagatccaagcagccttcagaactgat
gagatccggagagcacagccgaccccacaggacgaaatgcgttacgggatgagctacatc
cacgaaaccatctggaagggtgttcccaagtttctgcgtcgtctggacactgctctgaag
aacatcgggatcgacgagcgtctcccctacaatgttcctctcatccagttttgttcttgg
atgggtggcgaccgtgatggtacgtacgatccatccccagtttcggttttcagattattg
cttatgagtaagtatgtattaattagtggtgattttttggtttgcgtaggaaacccaaga
gttacgcctgaggtgacaagggatgtatgctacctgtcacggatgatggctgcaaacttg
tacttctatgggctagaagaactcatgtttgagctctctatgtggcgctgcaacgacgaa
ctccgtgctcgcgcgcaagaaatacacagtgctccgaagaaagctgccaagcactacata
gaattctggaagcaaattcctctaagtgagccgtatcgcgtggtgcttggtgacgtgagg
gacaaactgtacaacacccgcgagcgtgcgcgccaactgctgaccaatgagttttctgac
attccggaggaattgacctttagcaatgttcagcagttcctggagccccttgagctgtgc
tacaaatcactgtgcgagagcggcgacaagacgatcgccgacgggaggctgctggacttc
ctccggcaggtctccgccttcgggctctccctcgtgaagctggacatccggcaggagtcg
gagcggcacaccgacgtgatcgacgccatcaccacgcacatcggcatcggctcctaccgc
tcctggcccgaggagaagcgccaggagtggctgctgtccgagctgcaaggcaagcgcccg
ctgctcgccccggacatgccccagaccgaggagatcgccgacgtgctcggctgcttccgc
gtcctcgccgagctgccccgcgacagcttcggcccctacatcatctccatggccaccgcg
ccgtcggacgtgctcgccgtcgagctcctgcagcgcgagtgccacatacgcgacccgctg
cccgtggtgccgctcttcgagaggctcgccgacctgcagaacgggcccgcgtccatggag
cgcctcttctccgcggactggtacctgaagcggatcaacggcaagcagcaggtcatgatc
ggctactccgactccggcaaggacgccggccgcctgtccgcggcgtggcagctgtacagg
gcgcaggaggagctcgcgcaggtggccaagaaatacaacgtcaagctgaccatgttccac
ggccgcggcggcaccgtcggcaggggtggcggcccgtcgcacctcgccatcctgtcgcag
ccgccggacaccatcaacgggtccatccgggtgacgatccagggcgaggtcatcgagcac
tccttcggcgaggagcacctctgcttccggacgctggagcggttcacggcggcgacgctg
gagcacggcatgcacccgccggtgtcccccaagcccgagtggcgcaagctcatggacgag
atggccgtcgtggccacggacgagtaccgctccatcgtcgtcagggagccgcgcttcgtc
gagtacttccgatcggccacgcctgagacggagtacggcaagatgaacatcggcagccgg
ccggcgaagaggaagccccagggcggcatcacgtcgctccgcgcgatcccctggatcttc
tcgtggacgcagacgaggttccacctccccgtgtggctcggcgtcggcgccgcgttccag
tccgccattaagaaggacagcaagaacatccagaagctcaaggagatgtacaaggagtgg
cccttcttcagggtcaccattgacctgctggaaatggtcttcgccaagggggaccccagc
atcgccgccttgtacgacgagctgcttgtcgccgacgagctcaagcccttgggggagcag
ctgaggaacaagtacctggagacgcagcagcttctcctgcagatcgctgggcacaaggaa
atcctcgagggcgatccctacctcaagcaggggctgcggctgcgcaacccctacatcacg
acgctgaacgtgttccaggcctacaccctgaagctgatgagggacccgagcttcaaggtc
gagaagcagccgccaatgtccaaggagttctccgacgagaagaagcccgccgggctggtg
gagctcaaccctgccagcgagtacccgccggggctggaggacacgctcatcctcaccatg
aagggtatcgccgccggcatgcagaacaccggctag
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