Panicum virgatum (switchgrass): 120671001
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Entry
120671001 CDS
T07260
Name
(RefSeq) receptor kinase-like protein Xa21
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
LRR_1
LRR_8
LRR_4
Pkinase
PK_Tyr_Ser-Thr
LRRNT_2
ABC1
APH
DUF4519
Motif
Other DBs
NCBI-GeneID:
120671001
NCBI-ProteinID:
XP_039807129
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Position
4N:38121680..38125316
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AA seq
1129 aa
AA seq
DB search
MASLGILSPCLVWLLCLITFGSLPEATCSERENDQQALLCFKSQLSAPADVFATWSNASL
EFCSWHGITCSQQSPRRVIVLDLASEGITGTISPCIANLTSLERLQLSNNSFHGSIPSEL
GLLSQLSSLNLSINSLEGNIPSELSSCSQLQILGLWNNSLHGEIPSALTQCIHLQEINVS
NNNLEGSIPSLFGTLPELRILNLASNKLSGVIPPSLGSSLSLKYVDLGRNAITGGIPESL
ASSSSLQVLRLMRNSLSGELPEALFNSSSLIAICLQENKFVGSIPPVTATSPSVKHLHLG
GNSLSGTIPASLGNFSSLLDLRLTRNKLVGSIPGSIGYLPTLSLLNLNLNNLSGPVPPSL
FNMTSLTALAMANNSLNGRLPSHIGYTLPKIQILLLSSNNFDGPIPASLFNAFHMQWLYL
GGNRLTGPVPFFGSLPNLEELELAYNMLEAGDWGFVSSLSNCSRLTRLDLSGNNFQGKLP
SSIGNLSVSLKVLWLRDNNISGPIPPEMGNLKNLNQLYMDYNRLTGSIPPTIGNLKSLVV
LAGAQNRFSGMIPDAIGNLVQLTDLKLDANNLSGRIPASIGRCTQLQILNLAHNALNGSI
PRSILKISSLSQEFDLSHNYLSGAIPEEIGNLINLNKLSISNNMLSGKIPSTLGQCVLLE
YLKMQNNLFTGSIPQSFAELVGIKELDISRNNLSGKILEFFTSLNYLHYLNLSFNNFDGA
VPRGGIFANASAVSIEGNDQLCSSVLTGGIPLCSARGDDRKSKHTHLVLVAKIVIPVVVI
ILFCLAAFFWRKRMQAKAHVQQLNKNMKNITYDDIVKATYMFSSTNLIGSGSFGNVYKAS
MSLHKDQVAIKIFNLDIYGAHRSFLAECEALRNARHRNIVKIITLCSSVDPTGAEFKAIV
FPYMLNENLDMWLNQSLHQHSQRKILTLSQRINVAVDLANAMDYLHNQCASPIIHCDLKP
SNILLDHEMVAYVSDFGLARFQCTKSSINKDSSATLASLKGSIGYIPPEYGMSQDISTMG
DVYSFGVLLLEMLTGCRPTDEKFSNGTSLHEFVDKTFPKNINEIVDPTMLQDDISATEVL
QSCIIPLLKIGLSCSMTSPKERPGMDKVSTEIVAIKNMFSRIHEHDQSK
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgggcatcttgtcgccatgtcttgtttggcttctttgtctcatcaccttt
ggtagcctaccagaggccacctgcagtgaaagagaaaatgaccaacaagcactcctctgc
ttcaagtcccagctatctgctccagctgatgtttttgccacatggagcaatgcatccttg
gagttttgcagctggcacgggatcacttgcagtcaacagtcccctcgccgagttattgtg
ctggatctcgcatcagaaggaattacaggtaccatatcaccttgtattgccaatctcacc
tctcttgaaaggctgcaactgtcaaacaatagcttccacgggagcataccatcagagctc
ggactacttagccaactcagcagtctgaacttaagcatcaactctcttgaaggtaacatc
ccttctgagctttcttcatgttcccaacttcaaatccttggattgtggaacaattccctt
cacggggagataccatctgcccttactcaatgcattcatcttcaggagattaacgttagc
aacaacaatctagaaggaagcattccctctctttttggtactcttccagagctgcggata
ctaaatctcgctagcaacaagcttagtggtgtcataccgccctctttgggcagcagcctt
tctctcaaatacgttgatcttgggagaaatgctatcactggagggattccagagtccttg
gctagcagttcatctctccaagtacttaggctcatgagaaacagtcttagtggagaactc
ccagaggctctcttcaactcctcatcacttattgccatttgtctccaagaaaacaaattt
gttggttctataccacctgttactgcaacctctccctcagtaaaacatcttcatttggga
ggtaactctctttcaggaacaataccagcctcattgggcaacttttcttccctacttgat
cttcgtcttacacgaaataagttagttgggagcattcctgggagcataggctatttgcct
acattaagtttactgaacttgaatttaaacaacttgtctgggccagtaccaccctctctc
ttcaatatgacctccttaacagctcttgctatggcaaacaattcactcaatggaagattg
ccatcccacatcggctatacactaccaaaaattcagatactacttctctcatcaaacaat
tttgatggtccaattccagcttctcttttcaatgccttccatatgcagtggctttaccta
ggaggaaacaggctaactgggcccgttccattcttcggatcattgccgaatttggaagaa
ctagaactggcatataacatgctagaagcaggagactggggttttgtctcttcactatca
aattgctccagattaacaagactggatctgtctgggaacaatttccaagggaaattgcca
agttctattggcaatctttctgttagtctcaaagtattgtggctaagggacaacaacatt
tctgggcccataccacccgagatgggcaatctcaagaaccttaatcaattgtatatggat
tacaatcgactcactggtagtataccaccaacaattgggaatctaaaaagtttggtagtt
ctagctggggcacaaaacagattctcaggcatgatccctgatgctattggcaaccttgtt
cagctgacggatctgaaattggatgcaaacaacttgagtggcaggatacctgcaagtata
ggacgttgtacccaactccaaatactcaatcttgctcacaatgcactaaatggtagtata
ccaagatcaatcctcaaaatttcttctctttctcaagaatttgacttgtcacacaactac
ttatctggagcaataccggaggaaatcggcaatctcatcaatttgaataaacttagcatc
tcaaacaacatgctgtctggcaagatcccgtccactcttggccagtgtgtgcttctcgaa
tatcttaagatgcaaaacaacttatttacaggaagcattccacaatcgtttgcagaactg
gtaggaatcaaagagttggatatttctcggaacaatttgtctggaaaaatactagagttc
ttcacgtccttgaattatctccattacctcaatttatccttcaacaattttgatggagca
gttccaagaggtggtatttttgccaatgctagtgcagtgtcaatcgaaggaaatgatcag
ctgtgctctagtgttctaacaggaggtatccctctttgttcagcaaggggtgatgacagg
aaaagcaagcacactcatttggttctagttgcaaagatagtaataccagttgttgtaatc
atactgttttgtcttgccgcatttttctggaggaagagaatgcaggcaaaagcacatgtg
caacaactcaataagaacatgaagaacattacatatgacgacatagtaaaggcaacatat
atgttctcttctactaacttaattggctcaggttcatttggaaacgtttacaaggctagc
atgagtcttcacaaagatcaagtggccatcaagatttttaacctcgacatatatggagca
cataggagctttcttgcagaatgtgaagccctcagaaatgcccggcatcgaaatattgta
aaaatcattactttatgctcttcagtggatcctactggggcagagttcaaggccatagtt
ttcccatatatgctgaatgagaacctagacatgtggctaaatcagagtttacatcaacat
agtcaaagaaagattctgactttaagtcaaagaatcaatgtagcagtggatttagcaaat
gcaatggattatcttcacaaccaatgtgcatctccaataatacactgcgacttgaagcca
agcaatattcttttggaccatgagatggtggcatatgtcagtgactttggactagcaagg
ttccaatgtactaaatcaagtataaataaagatagttcagcaactttggctagcctaaaa
gggtccatcggatatatcccaccagagtatggcatgagccaagacatatcaaccatgggt
gatgtttatagtttcggagtgctcctgctggaaatgttgacaggttgtcgtcccactgat
gaaaaattcagtaatggtacaagtctgcatgagtttgttgataaaacatttccaaagaac
atcaatgagattgttgatcctaccatgctacaagatgacatcagcgcaactgaagttcta
cagagttgcataattcccttgctcaaaattggactgtcctgttccatgacatcacccaaa
gagcggcctggaatggacaaagtttctactgaaatcgttgcaatcaagaatatgttctca
agaatccatgaacatgatcaatcgaaatag
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