Panicum virgatum (switchgrass): 120675362
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Entry
120675362 CDS
T07260
Name
(RefSeq) farnesyl pyrophosphate synthase-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00900
Terpenoid backbone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120675362
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pvir01006
]
120675362
Enzymes [BR:
pvir01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
120675362
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
120675362
Prenyltransferases [BR:
pvir01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
120675362
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
120675362
NCBI-ProteinID:
XP_039812499
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All DBs
Position
5N:53143823..53160367
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AA seq
356 aa
AA seq
DB search
MATAGAVDGKGTGGTDKMAALKVIYNKLQAEVLEDHAIEVTHESAIQWIDRMMDYNVLGG
KCNRLLSVIDTYNILKGADVISQEETFLACTLGWCMEWLQAVYLMLDDIMDNSQTRRGQP
CWFRVPQVGLIAINDAIILHNHVPRILRRHFKTKPYYVDIIDLFNEAEFKAVSSQLLDLI
ITHDGRKDLNRYNETIYRHIAQYKTAYYSFYIPVACALLLAGENLDNFGDVKNILIEIGI
YFQIQDDYLDCFGDPELTGKIGTDIEESKCSWLVVQALEHTDENQKSILIENYGKSDPAC
VAKVKDLYKELNLELVFREYERETYIKLIGTIEAQLNKAVQTLLKSFLHKIYKREK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgggggcggtggatggcaaaggcaccggcggcaccgataagatggctgcg
ttgaaggtgatatacaacaagctccaggcggaggtgctcgaggaccacgccatcgaggtc
actcacgagtcagccatccagtggatcgaccgcatgatggattataatgtgctcggagga
aagtgcaaccgactgctctctgtcattgatacctataatatactgaagggtgctgatgtt
atcagccaagaagagacatttcttgcttgcacccttggttggtgtatggaatggcttcaa
gctgtttatcttatgctcgatgatattatggacaactcccagacacgacgtggccagcct
tgctggtttagggtgcctcaggttggcctcattgctataaatgatgcaattatccttcac
aaccatgttccgcgtatccttcggcgccacttcaaaacgaagccatattatgttgatatc
attgatttgttcaatgaggcagagttcaaggcagtttcaagtcagttgttggatcttatc
attactcatgatggtagaaaggatctgaatagatataacgaaacaatttaccgccacatc
gctcaatacaagacagcctactactccttttatattcctgttgcatgtgctttgttgttg
gctggtgagaacctggataactttggtgatgtaaagaacattctcattgaaattggaata
tactttcagatccaggatgattatctagactgttttggtgaccctgaactcaccggcaag
attggaactgatattgaagagtccaagtgttcctggttagttgtgcaagctcttgaacac
actgatgagaaccagaagagcattctgattgaaaattatggaaagtctgatccagcatgt
gttgcaaaagtgaaggacttgtacaaagagcttaatctggagttggtgtttcgtgagtac
gagagggagacctacatcaagctgatcggtaccatcgaggcccagctgaacaaggccgtt
cagactcttttgaagtccttcctgcacaagatctacaagagagagaagtaa
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