Panicum virgatum (switchgrass): 120676187
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Entry
120676187 CDS
T07260
Name
(RefSeq) receptor-like serine/threonine-protein kinase SD1-8
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
B_lectin
S_locus_glycop
PAN_2
DUF3403
PQQ
PQQ_2
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
120676187
NCBI-ProteinID:
XP_039813353
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Position
5N:59794105..59798530
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AA seq
849 aa
AA seq
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MRAGALCLVLLAAFLPLSASTDSIGLAASIAGNQTLVSPGGVFQLGFFSPPDGGAGRRYL
GIWYYSIREPRPTVVWVANRQTPLVGSPGVFRLSADGRLVVLDAQNGTVVWSSAAPTRNV
TAGATARLRDDGNFVLSSDGSGSDQSVAWQSYDYPTDTLLPGMKLGVDLRAGITRNITSW
SSPADPSPGAYTFRLVLGGLPQFFLLRGAAKIYTSGPWNGEILTGVPYLKSNNFTFQVVS
GPDETYYSYSVGASSLLSRLVVDGTAGQVQRFVWVNGSWSSFWYYPTDPCDNYAKCGPFG
YCDTAQQTTQCSCLPGFQPRSPQQWNLRDGTGGCVRTTNLSCGGNGSSDGFWVVSRMKLP
EATNATVYADMTLERCRQVCLGNCSCRAYAAANVSGGVSRGCVIWAVDLLDMRQYTTFVE
DVHIRLARSEIDALNAAAAAAAANGRGRPSKRVVTAVVATVASVLLLLAVGCCVWRKRRK
RQGETDSSAPAGAEDVLPFSARKHPALEEDWKCAKKDVDLPLFDLEVILAATDNFALDNK
IGEGGFGPVYMGKLEDGQEVAVKRLSRRSMQGVVEFKNEVKLIAKLQHRNLVRLLGCCID
EDERMLLYEYMHNQSLDTFIFDEGKRRLLRWQQRFDIILGIARGLQYLHEDSRFRIIHRD
LKASNVLLDRNMVPKISDFGIARMFGGDQTTEYTKKVIGTYGYMSPEYAMDGVFSMKSDI
YSFGVMVLEIITGKRNRGFYEVELDLNLLRYAWMLWKEGRSVDLLDELMDGSFNYGEVLR
CVQVALLCVEVQPRNRPLMSSVVMMLASENATVPEPNEPGVNIGKSTSDTESSQGLTANN
VTITAIDAR
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgggcgcgctctgcctcgtcctcctcgccgcgttcctcccgctttccgcgtcc
accgactccatcggcctggccgcgtccatcgccggcaaccagacgctcgtctcgcccggg
ggagtcttccagctcggcttcttcagccccccggacggcggcgccggcaggaggtacctc
ggcatttggtactacagcatccgggagccgaggccgaccgtcgtgtgggtcgccaaccgc
cagaccccgctcgtgggctccccgggcgtattccgcctctccgccgacggccgcctcgtc
gtcctcgacgcccagaacggcaccgtcgtctggtcctccgcggcgcccaccaggaacgtg
accgccggcgccaccgcgcggctccgggacgacggtaacttcgtcctcagctcggacggc
agcggctccgaccagagcgtggcgtggcagagctacgactacccgacggacacgctgctc
ccgggcatgaagctcggggtggacctgagggccggcatcacccggaacatcacgtcgtgg
agcagccccgccgacccttcccccggcgcctacacgttccggctggtcctcggcggcctg
ccgcagttcttcctcctccggggcgccgccaagatctacacgagcgggccgtggaacggc
gagatcctcaccggcgtgccgtacctcaagtccaacaacttcaccttccaggtcgtgtcg
ggccccgacgagacgtactacagctactccgtcggcgcgtcctcgctgctctcgcggctc
gtcgtggacggcacggcggggcaggtgcagcggttcgtgtgggtcaacggcagctggagc
agcttctggtactacccgaccgacccctgcgacaactacgccaagtgcgggccgttcggg
tactgcgacaccgcccagcagaccacccagtgcagctgcctgccggggttccagccgcgg
tcgccgcagcagtggaacctccgggacggcaccggcggctgcgttaggaccaccaacctg
agctgcggcggcaacgggagcagcgacgggttctgggtggtgagccggatgaagctgccg
gaggccacgaacgcgacggtgtacgccgacatgacgctggagcggtgccggcaggtgtgc
ctgggcaactgcagctgccgggcgtacgccgcggcgaacgtcagcgggggagtcagccgc
gggtgcgtcatctgggccgtcgatctgctggacatgcggcagtacacgacgttcgtggag
gacgtgcacatacggctcgcgcggtcggagatagacgccctcaacgccgccgccgccgcc
gccgcagcaaacggccggggccgtcccagcaagcgcgtggtgaccgcggtcgtcgcgacc
gtcgccagcgtgctcctcctactggcggtcggctgctgcgtctggaggaagaggaggaaa
cgtcagggcgagacggattcgtcggcgccggccggtgcagaggatgtgctcccgttcagt
gccaggaaacaccccgcgctggaggaggactggaaatgcgccaagaaagacgtcgacctc
ccgttgtttgacctggaggtgatcctggccgccaccgacaactttgctctggacaacaag
attggcgagggcggattcggccctgtttacatggggaagctcgaggacgggcaagaagta
gccgtgaagaggctgtcccggagatcgatgcaaggggtggtggagttcaagaacgaggtg
aagctgatcgccaagctccagcacaggaacctcgtcaggctgctcggctgctgcatcgac
gaggacgagaggatgctcctgtacgagtacatgcacaaccagagcctcgacaccttcata
tttgatgaagggaagcggaggttgctgaggtggcagcaacgctttgacatcatcctgggg
atcgcgcggggtctgcagtatctgcacgaggattcgaggttcaggatcatccatagggac
ctgaaggctagcaacgtgctgctggacagaaacatggtccccaaaatctcagactttggt
attgcaagaatgtttggaggtgatcagaccactgaatataccaaaaaagtcatcgggaca
tatggttacatgtctccagaatatgcgatggatggcgtgttctccatgaagtcagacatc
tacagcttcggcgtgatggtcctagagatcatcactggcaagaggaaccgaggcttctac
gaagtcgagcttgatctgaacctcctcagatacgcatggatgctgtggaaggaaggccgg
agcgttgatttgctggacgagttgatggacggcagcttcaactacggcgaggtgcttcgg
tgcgtccaggtggccctcctgtgcgtggaagtgcagcccaggaacaggcccctgatgtcg
tcggtggtcatgatgctggccagcgagaacgcgacggtgccggagcccaacgagcccggg
gtgaacatcgggaagagcacgtcggacacggagtcgtctcagggcctcaccgcgaacaat
gtcacgataactgcgatagatgctaggtag
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