Panicum virgatum (switchgrass): 120687605
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Entry
120687605 CDS
T07260
Name
(RefSeq) indole-3-glycerol phosphate lyase, chloroplastic-like
KO
K13222
indole-3-glycerol-phosphate lyase [EC:
4.1.2.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00402
Benzoxazinoid biosynthesis
pvir00999
Biosynthesis of various plant secondary metabolites
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00402 Benzoxazinoid biosynthesis
120687605
00999 Biosynthesis of various plant secondary metabolites
120687605
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.8 indole-3-glycerol-phosphate lyase
120687605
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Motif
Pfam:
Trp_syntA
Motif
Other DBs
NCBI-GeneID:
120687605
NCBI-ProteinID:
XP_039825562
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Position
9N:complement(4169913..4170705)
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AA seq
191 aa
AA seq
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MAFAIKAASTSNSTSSPAVHQLLSLTTRMASAAKMPAGRRNAAAVIRAVAAAVAPPPAPA
PARPTGDQRCLRPCPGSRRRTAFIPYITAGDPDLATTAEALRLLDACGADVIELGMPFSD
PYADGPVIQASAARALASGTTTDGVLAMLKEVAPELSCPVVLFSYFNPIVRRGLADFAAA
AKDAGVDGVKP
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgccatcaaggctgcatcgacctccaactcgacttcttccccggcggttcac
cagttgttatcgctcacgacgcggatggcgtcggccgcaaagatgccggcggggcggagg
aatgctgcagcggtcatcagggcggtcgccgccgctgtggctccgccgcctgccccggcg
ccggccaggccaacgggcgaccagcggtgcctcagaccatgtccaggctcaaggcgcagg
acggcgttcatcccgtacatcaccgccggcgaccccgacctggccacgacggcggaggcg
ctgcggctcctggacgcctgcggcgccgacgtcatcgagctcggcatgcccttctccgac
ccctacgcggacgggcccgtcatccaggcctcggcagcgcgggcgttggcgagcggcacg
acgacggatggcgtgctggcgatgctcaaggaggtggcgccggagctgtcgtgcccggtg
gtgctcttctcctacttcaaccccatcgtccggcgggggctggccgacttcgccgccgcc
gccaaagatgccggtgtagacggagtgaagccatga
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