Panicum virgatum (switchgrass): 120687615
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Entry
120687615 CDS
T07260
Name
(RefSeq) indole-3-glycerol phosphate lyase, chloroplastic-like
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00260
Glycine, serine and threonine metabolism
pvir00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120687615
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
120687615
Enzymes [BR:
pvir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
120687615
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Motif
Pfam:
Trp_syntA
ALF
Motif
Other DBs
NCBI-GeneID:
120687615
NCBI-ProteinID:
XP_039825570
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Position
9N:4226940..4227599
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AA seq
142 aa
AA seq
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MSRLKAQGKTAFIPYITAGDPDLATTAEALRLLDACGADVIEVGMPFSDPDADGPVIQAS
AARALASGTTTDGVLAMLKEVTPELSCPVVLFSYFNPIVRRGLADFAAAAKDAGVDGLIV
PDLPYAATCALRSEAMKTNKSW
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggctcaaggcgcagggcaaaacggcgttcatcccgtacatcaccgccggcgac
cccgacctagccacgacggcggaggcgctgcggctccttgacgcctgcggcgccgacgtc
atcgaggtcggcatgcccttctccgaccccgacgccgacgggcccgtcatccaggcctcg
gcggcgcgggcgctggcgagcggcacgacgacggatggcgtgctggcgatgctcaaggag
gtgacgccggagctgtcgtgcccggtggtgctcttctcctacttcaaccccatcgtccgg
cgggggctggccgacttcgccgccgccgccaaagatgccggtgtagacggtctgatagtc
cccgacctcccttatgctgccacgtgtgccctcaggagtgaagccatgaaaacgaacaag
agctggtag
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