Panicum virgatum (switchgrass): 120688590
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Entry
120688590 CDS
T07260
Name
(RefSeq) tryptophan synthase alpha chain-like
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00260
Glycine, serine and threonine metabolism
pvir00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120688590
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
120688590
Enzymes [BR:
pvir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
120688590
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GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
BtpA
ThiG
PcrB
TMP-TENI
FMN_dh
NanE
IGPS
Motif
Other DBs
NCBI-GeneID:
120688590
NCBI-ProteinID:
XP_039826888
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Position
9N:4260917..4264401
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AA seq
276 aa
AA seq
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MADHGVVTGKRTVAETFSRLREQGKTAFIPFITAGDPDLATTSKALKILDSCGSDVIEVG
VPYSDPLADGPVIQASATRALKKGTTLESVIGMLKGVAPELSCPIVLFTYYNPILKRGVR
NFMATIRQAGVNGLVVPDLPLEETVLLRSEAIMHSIELVLLTTPTTPTERMMEIAKASEG
FLYLVSAVGVTGARSNVNLRVEHLLREIKKVTDKPVAVGFGVSTPEHVKQIAGWGADGVI
IGSAIVRQLCEAGTPEEGLKRLEEYTRNIKAAMPLR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccatggcgtggtcaccgggaagcgcaccgtcgcagagaccttctctaggctc
agggagcagggcaagactgcattcattccattcatcaccgcgggtgatcctgacttagca
accacatcgaaagcattgaagatcctcgattcctgcggttcagatgtgattgaggttggc
gtaccatactcggatccgctggctgatgggccggttattcaggcatctgcaacacgtgca
cttaagaaaggcactaccctcgaatctgtcatagggatgctgaaaggggttgcacctgag
ttgtcttgtcctatagttctcttcacatactacaacccaattctgaagcgtggggtgcga
aacttcatggctactatcagacaagctggcgtaaatggacttgtagtacctgatcttcct
ttggaggagacagtgttgctgaggagcgaggccattatgcacagcatagagctggtgctg
cttacaacgccaaccactccaacagagaggatgatggaaattgcaaaagcttcagaagga
tttctttatcttgtgagtgctgttggagttacaggtgcacgctcaaatgtaaacttacgt
gtggaacatcttcttagggagatcaagaaggttacagacaaacctgtagctgttggcttt
ggtgtatcaaccccggagcatgtgaaacagattgcaggctggggagcagatggtgtaatt
attgggagtgcaattgttagacagttatgtgaagctggtactcctgaagaagggctgaaa
aggctagaggagtacaccaggaatataaaggccgccatgccattgaggtga
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