Panicum virgatum (switchgrass): 120694220
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Entry
120694220 CDS
T07260
Name
(RefSeq) indole-3-glycerol phosphate lyase, chloroplastic-like
KO
K13222
indole-3-glycerol-phosphate lyase [EC:
4.1.2.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00402
Benzoxazinoid biosynthesis
pvir00999
Biosynthesis of various plant secondary metabolites
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00402 Benzoxazinoid biosynthesis
120694220
00999 Biosynthesis of various plant secondary metabolites
120694220
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.8 indole-3-glycerol-phosphate lyase
120694220
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
BtpA
ThiG
FMN_dh
IGPS
NMO
NanE
TMP-TENI
Ribul_P_3_epim
Motif
Other DBs
NCBI-GeneID:
120694220
NCBI-ProteinID:
XP_039833309
LinkDB
All DBs
Position
Unknown
AA seq
188 aa
AA seq
DB search
MDGMLAMLKEVKPELSCPVVLFSYFNPIVRWGLADFTAAAKEAGVDGLIVPNLPYAATYD
LRSEAMKNNLELVLLTTPSTPEERMKEITRASEGFIYLVNVDGVTGPRANVSTRVESLIQ
EVKQVTDKPVAVGFGISRPEHVKQIAEWGADGVIIGSAMVKQLGEAASPKEGLKRLEDYT
MSMKNALP
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggatggcatgctggcgatgctcaaggaggtgaagccggagctgtcgtgcccggtggtg
ctcttctcctatttcaaccccatcgtccggtgggggctggctgacttcaccgccgccgcc
aaagaagccggtgtagacggtctgatagtccccaacctcccttatgctgccacctatgac
ctcaggagtgaagccatgaagaacaacctcgagctggtgctgctcacaacaccatctaca
ccggaagagcggatgaaggaaatcacaagagcttctgaaggttttatttatcttgtgaat
gtcgatggcgttacaggtccccgcgcaaacgtgagcacacgtgtcgaatctctcattcaa
gaggttaaacaggtcactgacaaacccgtggctgttggatttggcatatcaagacctgag
catgtaaagcagattgcggagtggggagctgatggagttatcatcggcagtgcaatggtg
aaacagttaggcgaagcagcatctcccaaagaaggtctaaaacggctagaggattacacc
atgagcatgaagaatgcattaccatga
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