Panicum virgatum (switchgrass): 120694263
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Entry
120694263 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120694263 isoform X1
Organism
pvir
Panicum virgatum (switchgrass)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAP42
RabGAP-TBC
Microtub_bd
Kinesin
ubiquitin
Motif
Other DBs
NCBI-GeneID:
120694263
NCBI-ProteinID:
XP_039833368
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MMRWGNSGQAADSFYQVRPDCSQNVPSTKFKIKAGKTLSVRKWHAAFTREGCLDIASVLS
RIQRGGVHPAIRGEVWEFLLGCYDPGSTFDERDQIRHRRRMQYARWKEECREMDSHVGSG
KIITAPIITEDGFPINDPLVLLEATQGTSSSSSSSSTRVEVSDSTNRVTDRQIVDWKLTL
HQIGSCMIGLDVLRTDRSMVFYENKENLQKLWDILAVYAWIDKEVGYCQGMSDLCSPMIV
LLNDEADAFWCFERLMRRLRGNFRCTQQSVGVENQLQHLASIIQVLDPKLHDHLETLGGG
DYLFAFRMFMVLFRRELSFGDSLYLWEVPYYLAEMTEKIAQEDRIPVLKASQDHLKEFIA
LCEVLELIPEDELELSRQKQPDTMANRRTQKVARFKRQKAAETKLQEIRERKERRGRSLR
AAALSAPIETGEEDDLEDDGEEEREAWLATISLALCKAFDLLDMLKKEEEMLLAVKERKA
KDGNAFAREMLDEQTKKAEAWHHNAANRVAYSKPADPITCATFAQDVIEGRASVSQAHEH
KHQPLIFGPANLVGGGLTSERERMAAQVFQPSCRMPTMSIEEAGLREMKMMEKWQDRATK
TMKEANSAWHNDGTSSAQEDEDAINFALLPDEALLASQLEGDRRSSIEKAYNAALREAEK
IHTGRRTKPTARWPKKVMEVFQMIYMATCMTKEVRFKRGEENWVDDPIVHDMALELFART
QRAYSGQQLHNKWKNMKLDKILKEEDQKLDIEGPNLPPPASTPPPQHLGFTATANGMEID
TSQPPIVFKSQLYTLTGVPPECQKIIGKGGTLEDNGNWSDLGVKDGQKLMMIGTNAAITK
VLQEEVDTLVIAAANNLSTRELSKSLQLPAIEFLLEENGHKSDLEILRKKMEHLDIENKK
DKDELQQEIAILKKRQMGYINEVDLLKKQLYTAEALRSDMHNQLMELKGSIRVFCRVRPI
LDKSSSEDGAIYCLEKGQFVGRRVYLETSSGAIKAFTCDRVFPPGVSQNDIFVEISGLVK
SAMDGKKVCIFAYGQTGSGKHLPC
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgatgagatgggggaacagtgggcaggccgcggattccttctaccaggtccgcccggat
tgcagccaaaacgtccccagcaccaagttcaagatcaaggccggcaagacattgagcgtg
cggaaatggcacgctgcgtttacgcgtgaaggctgcttggacatcgcttctgttctaagc
cgcatacagagagggggtgtccaccctgccatcaggggggaggtttgggagttcttgctt
ggctgctatgatcctgggagcaccttcgatgagcgggaccagattaggcacaggagaagg
atgcagtatgctagatggaaggaagagtgccgagagatggattctcacgttggcagtggt
aaaattatcactgccccaatcatcactgaggatggattccctatcaatgatccattggtt
ttactcgaggctacgcaaggtacttccagcagcagcagcagcagcagcaccagagttgag
gtcagcgactccacgaaccgtgtcactgataggcaaatcgttgactggaagcttacgctg
catcagatcggaagctgcatgataggccttgatgttctacgcactgaccgctccatggta
ttttatgagaacaaagaaaatcttcaaaagttgtgggatattctagctgtatatgcatgg
attgacaaagaagtcggttattgccaaggaatgagtgatttatgttcgcccatgatagta
ctgctgaacgatgaagcagatgcattttggtgctttgagaggttgatgcgtaggctgaga
gggaatttcagatgcacacagcagtctgttggagtggaaaaccagcttcagcatcttgct
tctatcattcaggtgctcgacccgaagttacatgaccacctagaaacacttggtgggggt
gactatctctttgcatttcgcatgttcatggtattgttccggcgagaactatcgtttggg
gactccttgtacctttgggaggttccctattaccttgcggaaatgaccgaaaagatagca
caggaggatcggatcccagttcttaaggcgtcacaagaccacttgaaggagttcattgct
ctatgtgaagtactagagctaattccagaggatgagctagaattgtctaggcagaagcag
cctgatactatggcaaacagaagaacgcagaaggttgcccggttcaaacgtcaaaaggct
gctgaaacgaagctccaagagatcagagagagaaaagaaaggcgtggacgctcactgaga
gcagctgctttatctgccccaattgaaactggagaggaagatgacttggaggatgatggg
gaggaagaaagagaggcttggttagctaccatctccttggctctctgcaaggcgtttgat
cttctcgacatgctaaagaaggaagaagaaatgcttctagctgtaaaggaaaggaaggca
aaggacgggaatgcatttgctcgtgaaatgcttgatgaacagacaaagaaggctgaagca
tggcaccataatgctgccaatcgtgtggcatattccaaaccagctgatccaatcacttgc
gcaacatttgctcaagatgtcattgaaggtagagcaagcgtttcacaagctcacgagcac
aaacaccagcccctgatatttggacctgcaaatcttgttggtggtggtctaaccagtgaa
agggaaagaatggcagcacaagtttttcagcctagttgcaggatgccaacaatgagcatc
gaagaagctggtttgcgcgagatgaaaatgatggagaagtggcaagacagggctaccaag
actatgaaagaagcaaactccgcgtggcacaatgatggcaccagctcggcccaagaggac
gaggacgccatcaattttgcgctactccctgatgaggctctcttggcatctcagctagag
ggagaccggagatcctctattgagaaggcctataatgcggcactccgcgaggctgaaaaa
atacacacaggaagaagaacaaaacccaccgcacgttggccgaagaaagtgatggaagtc
tttcagatgatctatatggcaacatgtatgacaaaagaagtgcgctttaaaagaggcgag
gagaattgggttgatgatcccatagttcacgatatggcgcttgagctctttgcgagaacg
caaagagcatatagcggccaacaattgcacaacaaatggaaaaatatgaaactagacaag
atactcaaagaagaagaccaaaaattggacattgagggtccgaaccttcctcctcctgca
agtactccacctccacagcacttaggattcacagccacggcaaatggcatggagattgac
actagccagccaccaattgttttcaagagtcagctgtacacacttacgggggttccacct
gaatgtcaaaagatcattggcaagggtggaacattggaggacaatgggaattggtctgat
ttgggggtgaaagatggtcaaaagttgatgatgataggcacgaatgctgcaatcaccaaa
gtactacaagaggaagtggataccttggtgattgcagctgcaaataatctatccacaagg
gagttgagcaaatcactccagttaccagcaatagagtttttgctggaggagaatggtcac
aagagtgaccttgaaatcttaagaaaaaagatggagcatctagatattgaaaacaagaag
gataaagatgaacttcagcaagaaattgcaattttaaagaaaaggcagatgggctacata
aatgaagttgatttgctaaaaaagcaactttacacggcggaagccttacgcagcgatatg
cataaccagctaatggaattaaagggaagcatacgggtcttctgccgtgtgcgacccatt
cttgacaagagcagtagtgaagatggtgcaatctattgcttggagaagggacagtttgtt
ggccgccgtgtttatctggaaacatcatcaggggctataaaagcttttacatgcgatcga
gtgttccctcctggagtttcacaaaatgatatctttgttgaaatatcaggattagtgaag
agtgcaatggatggcaagaaggtttgcatatttgcttatgggcagacaggctctggtaaa
catttaccatgttag
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