Panicum virgatum (switchgrass): 120697704
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Entry
120697704 CDS
T07260
Name
(RefSeq) calcium-dependent protein kinase 1-like isoform X1
KO
K13412
calcium-dependent protein kinase [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120697704
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120697704
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120697704
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CDPK family
120697704
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
EF-hand_1
EF-hand_7
PK_Tyr_Ser-Thr
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_4
AIF-1
EF-hand_9
SPARC_Ca_bdg
Kdo
Kinase-like
EFhand_Ca_insen
DUF5580_M
TFIIA
Caleosin
Motif
Other DBs
NCBI-GeneID:
120697704
NCBI-ProteinID:
XP_039836939
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Position
3K:13895106..13898906
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AA seq
557 aa
AA seq
DB search
MGGRASRHRAQSHDQGPNTSQHHHQQQHNRPKPKQPRPQPPPPQAPQPQAPHPARQRQHQ
QQQQQHQQQQHQQQQQQQPDAAAAAAAAGLGRVLGRPMEDVRVAYTFGRELGRGQFGVTY
LATHKASGRRYACKSIAARKLAHRDDVEDVRREVQIMHHLTGHRNIVELRGAYEDRHSVN
LVMELCEGGELFDRIITRGHYSERAAAALCREIVSVVHSCHSMGVMHRDLKPENFLFLNK
REDSPLKATDFGLSVFFKPGEQFKDLVGSAYYVAPEVLKRRYGAEADIWSAGVILYILLS
GVPPFWAENEDGIFDAVLRGHIDFASDPWPSISNSAKDLVKKMLRQDPKERLTAAEILNH
PWIREDGEAPDKPLDITVIGRMKQFRAMNKLKKVALKVVAENLSEEEIVGLKEMFKSLDT
DNSGTITLEELRTGLPKLGTKISESEIRQLMEAADVDGNGTIDYVEFISATMHMNRLEKE
DHIYKAFEYFDKDHSGHITVDELEEALKKYDMGDEATIKEIIAEVDTDHDGRIDYQEFVA
MMKNNSPEIVPNRRRMF
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgggaggccgagcctcccgccaccgcgcccaatcgcacgaccagggccccaacacatcg
cagcatcaccaccagcagcagcataaccgcccgaagcccaagcagccccggccgcagccc
ccgccgccgcaggcgccgcagccccaggctccccatcccgctcggcagcggcagcatcag
cagcagcagcagcagcatcagcagcagcagcatcagcagcagcagcagcagcagccggat
gccgccgcggcggccgcggccgccgggctgggccgggtgctagggcgccccatggaggac
gtccgcgtggcctacaccttcgggcgcgagcttggccggggccagttcggggtcacctac
ctcgccacccacaaggcctcgggccgccgctacgcctgcaagtccatcgcggcgcggaag
ctcgcgcatcgggacgacgtcgaggacgtgcgccgcgaggtgcagatcatgcaccacctc
acgggccaccgcaacatcgtcgagctccggggcgcctacgaggaccgccactcggtcaac
ctcgtcatggagctctgcgagggcggggagctcttcgaccggatcatcaccaggggccac
tactccgagcgcgccgccgccgcgctctgcagggagatcgtctccgttgtgcacagctgc
cactccatgggggtcatgcacagggacctcaagccggagaacttcctcttcctcaacaag
agggaggactcgccgctcaaggccactgactttggcctatccgtgttcttcaagcccggt
gagcagttcaaggatcttgtggggagtgcatattatgttgccccagaggtgcttaaaagg
cgatatggagctgaggcagacatatggagtgccggagtaatcctttacatcctactatct
ggtgttcctcctttctgggctgagaacgaagatggcatatttgacgctgttttgcgaggc
catattgatttcgcatctgatccctggccttcaatatccaatagtgccaaagatttggtc
aagaaaatgctacgacaagacccaaaggagcggcttactgctgctgaaattttgaaccat
ccatggattagagaggatggagaagcaccagacaaaccacttgatattacagtaattggt
agaatgaagcagttcagggcaatgaacaaacttaagaaggttgccttgaaggttgttgca
gagaacctgtcagaagaagagattgtgggactaaaagaaatgtttaaatcccttgatact
gataacagtgggacaataaccctggaggaattaagaactggtttaccaaagctgggcacc
aaaatttctgaatcagaaataaggcagctgatggaggcggctgatgttgatggaaatggt
accattgattatgttgaattcatatcagcaacaatgcacatgaatagactagagaaggag
gatcacatatataaggcattcgagtattttgataaggaccacagcgggcacataactgtt
gatgagttggaagaagctctgaagaagtatgatatgggtgatgaagcaacaattaaagaa
attattgctgaagtggatacagatcatgatgggagaattgactaccaggagtttgttgcc
atgatgaagaataacagccctgagattgttccaaatcgacggcgcatgttttaa
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