Panicum virgatum (switchgrass): 120698076
Help
Entry
120698076 CDS
T07260
Name
(RefSeq) receptor-like protein kinase HSL1
Organism
pvir
Panicum virgatum (switchgrass)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_1
PK_Tyr_Ser-Thr
Pkinase
LRR_4
LRR_8
LRRNT_2
Motif
Other DBs
NCBI-GeneID:
120698076
NCBI-ProteinID:
XP_039837488
LinkDB
All DBs
Position
3K:18299960..18303978
Genome browser
AA seq
1040 aa
AA seq
DB search
MAPGRALPLALALALACLLPRHAAAQQADEARLLLRIKRAWGDPAALASWGAAAAASHCN
WTYVSCDAAGRVASLALPNVTLPAGAALPDDIGGLAALTALDLSNTSVGGGFPAFLYDLT
ALVRVDLSSNRLAGVLPADIGRLGASLTYLALDLNSFTGAIPAAVSKLTNLTYLGLSGNQ
LTGTIPPELGLLVNLETIKLENNLFAAGTLPESFKNLTKLTTVWLANCSLGGEFPSYVTQ
MTEMEWLDLSTNGFIGSIPPGIWNLLKLQYLYLYSNNLTGEITISGPIGAASLVEVDLSM
NQLIGTIPESLGSLLQLRFLNLQQNNLTGGIPPSIAWLPSLVFLWLWDNHLSGELPAELG
KETPLLRDIQIDGNDFFGPIPEGICSHQQLWVLTASGNRLNGSIPTGLASCSALIWLQLQ
DNELSGEVPAALWTVPKLLTLCLQDNGQLSGSLPEKLYWNTTRIYIDNNRFTGRIPISAT
RLQRFHASNNSFSGDIPAEFAAGMPRLQELDLSANQLSGAIPESIASLTGVAQMNLSHNQ
LTGDIPAGLGSIPVLNLLDLSSNQLSGSIPPSLGSLRSSQLNLSSNQLTGEVPAALANPA
NDQSFLGNPGLCAAASMVGSLKGVRSCAAPPADHVSPRLRSVLLAAGVALVAVIAALAVF
VIRDIRRRKRRLAQAEEPWKLTPFHPLDFGEASVVRGLADENLIGKGGAGRVYRVAYTSR
SGGGAGGTVAVKRIWTGGKLDRSLERAFASEVDVLGHIRHSNIVKLLCCLSRAETKLLVY
EFMDNGSLDKWLHGHKWFKAGGATARAPSVRRAPLDWPARVKVAVGAARGLYYMHHECSP
PIVHRDVKCSNILLDSELNAKVADFGHARMLVEAGRADTVTAVAGSFGYMAPECAYTRMV
NEKVDVYSFGVVLLELTTGREASDGGEHGSLADWAWRHLQAGKSIAAATEKSIRDAGYGD
DVEAVFKLGIICTGRQPSTRPTMKDVLQILQRCEQAHRKVADEKVADYDAAPLLQVPGGS
RRKQLSDAKVSDDGGFDCNV
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcacccggccgcgccctgcccctggcgctcgccttggcgctggcgtgcctcctcccg
cgccacgccgcggcgcagcaggccgacgaggcgcggctgctgctccggatcaagcgggcg
tggggcgacccggcggcgctcgcgtcgtggggcgccgcggccgcggcctcgcactgcaac
tggacctacgtgtcctgcgacgcggcgggtcgcgtcgcgtcgctggcgctccccaacgtg
acgctgccggcgggcgccgcgctgcccgacgacatcggcgggctcgcggccctcacggcg
ctcgacctctccaacaccagcgtcggcggcggcttcccggcgttcctctacgacctcacc
gccctcgtgcgcgtcgacctctccagcaaccgcctcgccggggtgctcccggccgacatc
ggccggctcggggccagcctcacctacctcgccctggacctcaactccttcaccggcgcg
atcccggcggcggtgtccaagctcaccaacctgacgtacctcggcctcagcggaaaccag
ctcaccggcacgatcccaccggagctcggtttgctggttaacctcgagacgatcaagctc
gagaataatctgttcgccgccggcacgctgccggagtcgttcaagaacctgacgaagctg
accaccgtctggctggccaactgcagcctcggcggcgaattcccgagctacgtcacgcag
atgacggagatggagtggctcgacctgtccacaaacgggttcatcggcagcataccgccc
gggatttggaacctcctgaagctgcagtacctgtacctgtactccaacaacctcaccggc
gagatcaccatcagcggcccgatcggagcagcaagtttggtggaggttgacctgtcgatg
aaccagctgatcggaaccatcccagaaagtttagggagcttgctgcaactacggttcttg
aacttgcaacagaataatctcaccggcgggataccgccgagcattgcctggctgccgtcc
ttggtattcctgtggctgtgggacaaccacctcagcggggagctcccggcggagctcggg
aaggagacgccgctgttaagagacatccagatcgacggcaacgactttttcgggccgata
ccggaggggatctgcagccaccaacagttgtgggtgctcaccgcctccggtaaccgcctg
aacggctcgatcccgaccggtctcgccagctgctctgctctcatatggctccagctccaa
gataacgagttgtccggcgaggtgccggccgctctgtggacggtgccgaagcttctgacc
ttgtgcctgcaggacaacgggcagctgagcggaagccttccggagaagctgtactggaac
acgacgaggatttacatcgacaacaaccggttcaccggacggattccgatatcggccact
cgtctccagaggttccacgccagcaacaactcgttctccggcgacataccggcggagttt
gccgccgggatgccacggctgcaggagctggacctgtcggcgaaccagctctctggggct
atcccagagagcatcgcgtcgctcaccggcgtggcgcagatgaacctcagccacaaccag
ctcaccggcgatattccggcagggttgggctccataccggtgctcaacctgctggacctt
tcgtcgaaccagctctccggttccattccgccgtcgctgggatcgctgaggtctagccag
ctcaacttgtcctccaaccagctcaccggcgaggtcccggcggcgctggccaaccccgcc
aacgaccaaagcttcttgggcaacccggggctctgcgccgccgcgtcgatggtcgggagc
ctcaagggcgtgcgctcgtgcgcggccccgccagcggaccacgtctcgccgcgtctccgc
tcggtcctcctcgccgcgggcgtcgcgctcgtcgccgtcatcgcggcgctcgccgtattt
gtcatccgcgacatcaggaggcggaagcggcggctcgcgcaggctgaggagccctggaag
ctcacccctttccaccccctggacttcggcgaggcctccgtggtgcgcgggctcgccgac
gagaacctcatcggcaagggcggggcggggcgcgtgtaccgcgtcgcgtacaccagccgg
agcggcggcggcgcggggggcaccgtggccgtgaagcgcatctggaccggcgggaagctg
gaccggagcctggagcgcgcgttcgcgtcggaggtggacgtcctcggccacatccggcac
agcaacatcgtgaagctcctgtgctgcctctcccgcgcggagaccaagctcctcgtctac
gagttcatggacaacggtagcctggacaagtggctgcacgggcacaaatggttcaaggcc
gggggcgcgacggcgagggccccgtcggtccggcgggcgccgcttgactggccggcgagg
gtgaaggtggccgtcggcgccgcgcgcgggctctactacatgcaccacgagtgctcgccg
ccgatcgtgcaccgggacgtcaagtgcagcaacatcctgctcgactcggagctcaacgcc
aaggtcgccgacttcggccacgcaaggatgctggtcgaggccggcagggctgacacggtg
accgccgtcgccggatcgttcggttacatggctcccgagtgcgcgtacacgaggatggtg
aacgagaaggtcgacgtgtacagcttcggggttgtcctcctggagctgaccaccggcagg
gaggccagcgacggcggcgagcacgggtccctggccgactgggcgtggcggcacctgcag
gccggcaaaagcatcgccgccgccacggagaagagcatcagggacgccgggtacggcgac
gacgtcgaggccgtcttcaagctcgggattatatgcaccggccgccagccgtccacgcgg
ccgacgatgaaggacgtgctgcagatactgcagcgctgcgagcaggcgcaccggaaggtc
gccgacgagaaggtcgctgactacgacgccgccccgctactccaggtgccaggaggcagc
cgccggaaacagctctccgatgccaaagtgagcgacgatggcggtttcgactgcaacgtc
tga
DBGET
integrated database retrieval system
