Panicum virgatum (switchgrass): 120704328
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Entry
120704328 CDS
T07260
Name
(RefSeq) cysteine desulfurase, mitochondrial-like
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00730
Thiamine metabolism
pvir01100
Metabolic pathways
pvir01240
Biosynthesis of cofactors
pvir04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
120704328
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
120704328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120704328
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120704328
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pvir02048
]
120704328
Enzymes [BR:
pvir01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
120704328
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
120704328
Prokaryotic type
120704328
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
120704328
Prokaryotic defense system [BR:
pvir02048
]
DNA phosphothiolation system
Sulfur modification proteins
120704328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Pyridoxal_deC
NIPSNAP
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
120704328
NCBI-ProteinID:
XP_039844617
LinkDB
All DBs
Position
4K:complement(45211256..45215058)
Genome browser
AA seq
450 aa
AA seq
DB search
MALSRRLLPLFLRGGAPAVRALSTAVAPAAAAASEEEESITVKGVRISGRPLYMDMQATT
PVDPRVLDAMLPFYLSRYGNPHSRTHLYGWESDAAVEAARARVASLVGADPREIFFTSGA
TECNNIAVKGVMRFYRDRRRHVITTQTEHKCVLDSCRYLQQEGFEVTYLPVRSDGLVDLA
QLEDAIRPDTGLVSVMAVNNEIGVVQPLEEIGRICKEKGVPFHTDAAQALGKIPIDVNKM
GIGLMSLSGHKIYGPKGVGALYLRRRPRIRVEPQMSGGGQERGIRSGTVPTPLVVGFGAA
CEIAAQEMDYDHRRVSALQQRLLDGIRAQVDEVVINGSMEHRYPGNLNLSFAYVEGETLL
MGLKEVAVSSGSACTSASLEPSYVLRALGVEEDMAHTSIRFGIGRFTTEEEVDRAIELTV
HQVKKLRDMSPLYEMAKAGIDLKSIEWSQH
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggccctttcccgccgcctcctcccgctcttcctccgcggtggtgcccccgccgtccgc
gccctctccacggctgtcgcgcccgcggcggcggcggcctcggaggaggaggaatccatc
accgtgaagggcgtccgcatctcgggccgcccgctgtacatggacatgcaggcgacgacc
cccgtggacccgcgggtgctcgacgccatgctccccttctacctctcccgctacgggaac
ccgcactcccgcacgcacctctacggctgggaatccgacgccgccgtcgaggccgcgcgc
gcccgcgtcgcctccctcgtcggcgccgacccgcgcgagatcttcttcacctcgggcgcc
accgagtgcaacaacatcgccgtcaagggcgtcatgcgcttctaccgcgaccgccgccgc
cacgtcatcaccacgcagaccgagcacaagtgcgtgctcgactcctgccgctacctgcag
caggaggggttcgaggtcacctacctccccgtgcgcagcgacgggctcgtcgacctcgcg
cagctcgaggatgccatccgccccgacaccggcctcgtctcagtcatggccgtcaacaac
gagatcggcgtcgtgcagccgctcgaggagattgggcgcatctgcaaagagaaaggcgtg
ccgttccacactgacgccgcgcaggcgctggggaagatcccgattgatgtgaacaagatg
gggattgggcttatgtccctctccgggcacaagatttatggccccaagggcgtgggggca
ctctaccttcgccggcgtcctcgtatcagggtggagccacagatgagtggtggtgggcag
gagcgtggcatccgcagtggcacggtgcccacaccgcttgttgttggatttggtgctgcc
tgtgagattgcggctcaagagatggattatgaccataggcgagtcagtgctctgcagcag
aggctgctcgatggcatccgtgcgcaggtcgatgaggttgtcatcaatggaagcatggaa
caccgttacccaggcaacctgaacttgtcatttgcatatgtggagggagagaccttgctg
atggggctgaaagaggtggctgtgtcgagcggtagtgcctgcaccagtgccagcttggag
ccctcatatgttctgcgggcacttggggtggaggaggacatggcgcacacctctattcgc
tttggcattggccgctttaccaccgaggaagaggttgacagagcaattgagctcactgtg
catcaggtgaagaaactccgtgacatgagcccactctatgagatggctaaggctggcatt
gacctcaagagcatcgagtggtctcagcactga
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