Panicum virgatum (switchgrass): 120707642 Help Entry 120707642         CDS       T07260                                  Name (RefSeq) DNA ligase 6-like Organism pvir  Panicum virgatum (switchgrass) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DRMBL DNA_ligase_A_C UBA_4 Lactamase_B_2 RMMBL VASP_tetra Lactamase_B Motif Other DBs NCBI-GeneID:  120707642 NCBI-ProteinID:  XP_039848520 LinkDB All DBs Position 5K:complement(44271467..44287558) Genome browser AA seq 1388 aa AA seqDB search MAALISSSNASKSLSINTSAVFLSSLSSLPSTDAHPILTAASTPLPPVPASVPPTALIPG SRFLIDAFRHAGGFSVAYFLSHFHSDHYGGLGPSWRRGIVFCSAPTARLVSSVLSVPPQL VVALDVGVRVTVDGWGVTAVDANHCPGAVQFLFSSPGPNAERYVHTGDFRYTESMTHDPN FLEFVRADAVFLDTTYCNPKFTFPSQEESIDYVVNVIKRVKEESSAAGERVLCLIATYVV GKERILLEVAQRCGCSIHVDSRKMEILTVLGFGGENGVFTEDAAVTDVHVIGWNILGETW PYFRPNFVKMKEIMLERGYMKAIGFVPTGWMYETKKEGFAVRVKDSLEIHLVPYSEHSSY DELREYVKFLHPKRVIPTIGVNAGKLDSKEAITMQKHFSGLVDETANKQEFLMAFHRRST DAKFSIQHDGEDAVLLPAITSASEQLDTLKENITEEMKKELSDFLPSWVSGEQIMDLLMS SGGDVVKAASDFFERERDFFEEANGSCSGTPKSEKNHTSDHGSSADVSSQQECPLFSQKP AEHSTKLVNLTPMRMKSNTPKKEKRRGSGTANKPKKKGRLTSSTESGGRKQSTITNYFVR STATTSKSGTADKVYEEAHQNNVESDDQLTDIVKTQDQSVDQLLQIVDGGMSREYAVSLL ERAKGDVTVAVDIFYTSSENNNVIAIDKNIALQITENETKDKCSNTDLACDSSQATQKMP NLHLQTSLSQTVSTKISLPVEKYLPIEHACWTAGQLAPYLHLARTFDLVEKEKGKIKTMS IFCNMFRSLLALSPDDVLPAVYLCTNKISPDHENMELNIGGSLVVTALEESLGTSRSKIQ EMYKTYGDLGNVAQECRQNQTLLAPPRPLSIHDVYSMLRKLSVISGSGSAGRRKILVLHL IRSCREMEMKFLVRTLVRNLRIGAMMKTILPALAHAVVFDRKCAGDPAVSLEGIKTQLQS LSTEVAEAYNVIPNLDLLIPSLLREGTAFSASSLAMVPGTPLPPMLARITNGLTQALKAF GGKSFTCEYKYDGQRAQIHRLLDGSVRIFSRHMKESTPRFPDLVNMITELCRPEVSSFIL DAEVVGIDRKKGNKLMSFQELSSRERGNKHSSIAIDNIKVDICVFVFDIMFCNGERLLDC PLRQRRKYIHDLFQEKPGYFELAQQLTVEASEASPDNSSTLDRMNTFFRKACESSCEGIM LKTLDIDAGYSASKRCDSWLKVKRDYVEGLGDSLDLVPVGAWYGNGRKAGWYSPFLMACY NPETEEFQSVCRVMSGLSDEFYKEMKEFYSGERILPKKPVYYKTDEQPEVWFTTEQVWEI RGADLTLSPVHHAAIGLVHPSRGISVRMPRYIRSVPDRSPEDCSTATDIASMFKAQTRKM DVSREGPE NT seq 4167 nt NT seq  +upstreamnt  +downstreamnt atggccgctctcatatcctcctccaatgcctccaaatcgctctccattaacacatccgcg gtcttcctctcctccctctcctcgctcccttcgactgacgcccaccctatcctcactgcc gcctccacgccgctcccgcccgtcccggcctccgtgccgcctaccgcgctcattccgggc tcgcgcttcctcatcgacgccttccgccacgccgggggcttctctgtcgcctacttcctc tcgcacttccactccgaccactacggcggcctaggaccgtcctggcgccgcggcatcgtc ttctgctccgcgcccaccgcgcgcctcgtctcttccgtgctctccgtgccgccgcagctt gtcgtcgcgctcgatgtcggtgtccgtgtcaccgtcgatgggtggggcgtcaccgccgtc gacgccaatcactgccctggtgccgtgcagttcctcttctcctcccctggaccgaacgcc gagaggtatgtgcacaccggtgacttccgttacacggagtctatgacgcacgatcctaac tttctggagttcgtccgtgctgacgctgtgtttctggacaccacatactgcaaccccaag ttcacattcccttcccaagaggagtctatagattatgtggtgaacgtgatcaagcgtgtg aaagaggagagttcagcggcaggagagcgtgtgctgtgtttgatcgcgacctatgtcgtg ggcaaagagaggattttgctggaggttgcacagcgctgtgggtgctcaatccatgtggac agcaggaaaatggagattttgacagtattggggtttggtggggagaatggagtttttacc gaggatgcagcagtgacggatgtgcatgttatcgggtggaatatcttaggagagacgtgg ccctatttccgaccaaattttgtaaagatgaaggagatcatgttggagagagggtacatg aaggctatcgggtttgtaccaaccgggtggatgtatgaaaccaagaaggaaggttttgct gttagggtgaaagattcacttgagatccatcttgttccttacagtgagcactcgagctat gacgagttgcgagaatatgtaaagtttttgcacccaaagcgggtgatcccgaccattgga gtcaatgctggaaagctcgatagtaaggaggcaattacaatgcagaagcatttttctggg ttggtagatgagacagcaaacaaacaggagttcttgatggcattccatcgtaggtcaaca gatgctaaattctcaatccagcatgatggggaggatgctgttttgttaccagcaatcact tctgcttctgaacaacttgatactttgaaggagaatattacagaggaaatgaagaaagaa ctatcagatttcctgccctcatgggtcagcggggaacagatcatggacctgctgatgagc tcaggtggtgatgtggttaaagcagcatctgatttttttgagcgggaaagagatttcttt gaagaagcaaatggttcttgtagcgggacacccaagtcagagaaaaaccatacttctgat catgggtcttctgctgatgtgagtagtcagcaagaatgtcctttattttcacagaagcct gcggaacactctacaaaactggtaaatttgacccctatgagaatgaaatcaaatactccc aaaaaggaaaagaggaggggttctggcactgcaaacaaaccaaaaaagaaaggacgacta acttcctcaacagaatctggtgggcgcaagcagtccacaattacaaactatttcgttaga tctacagccaccacttctaaaagtggtacagctgataaagtatatgaggaggcacaccaa aataatgtggaaagtgacgatcagttaactgatattgtaaaaacacaagatcaaagtgta gaccagcttcttcagattgtagatggtggcatgtccagagaatatgcagtttctttgctt gagagggcaaaaggagatgtaactgtagcagttgatatattttacacttcaagtgagaac aacaatgtaattgctattgataagaatatcgcgctgcagattacggaaaatgaaactaaa gataaatgtagcaacacagacctggcttgtgattcttctcaggctactcaaaagatgcca aacttacatttacaaacctctttatcacaaaccgtttctaccaagatatcgctgccagtt gaaaagtatctacctattgagcatgcttgctggacagcaggacaacttgcaccatacttg cacttggctcgcacttttgatctggttgaaaaagaaaaaggaaagatcaaaactatgtca atattttgcaacatgttcaggagtttgcttgccttatcccctgatgatgttctacctgct gtttatctatgcactaataaaatttctcctgaccatgagaatatggaactgaacattggt gggagtcttgttgtaactgctctggaggaatcattaggaaccagcagatctaaaatacaa gagatgtacaaaacttacggcgatcttggtaatgttgcccaagaatgccgtcagaatcaa acattacttgctcctcctcggcctctctcgattcatgatgtatattccatgcttcggaaa ctaagtgtaatatcaggtagtgggagcgctggaagaagaaaaattcttgtcttgcatctt attcggtcttgtagggagatggaaatgaaatttcttgtcagaacactggttcgtaacttg cgtattggggctatgatgaaaacaatattacctgcgcttgcacatgctgttgtttttgat agaaagtgtgcaggagatcctgcagtgtccttggaaggcataaaaacacaactacagagt ctttcaactgaagttgccgaggcatacaatgtcattcctaatctggatctgctcattcct tctcttctgagagaaggaactgcattttcagcttcatccttggcaatggtgcctggcaca cctcttccacctatgcttgcaagaattactaatgggttgactcaagcactgaaagctttt ggtggcaaatcatttacgtgtgagtacaagtatgatggtcagcgtgcccagattcacaga ttacttgatggatctgtgcgaatattttcaaggcatatgaaagaatcaactcccagattt cctgacctagtgaacatgattacggagttgtgcaggcccgaagtgtccagcttcatactg gatgctgaggtggtgggaatcgataggaagaaaggaaacaagttgatgtcattccaagaa ctatcttcaagagaaagaggaaacaagcactcctccattgcgatcgataacataaaggtt gacatttgtgtgtttgtttttgacatcatgttctgcaatggagagaggctactggattgt cctcttcggcaaagaaggaagtacattcacgacttgttccaggagaagccaggatatttc gagttagctcagcagctaaccgtagaagccagcgaagcgtcaccggacaactctagcact ttggatagaatgaacacatttttcagaaaggcatgcgagtcttcttgtgagggtataatg ttgaagactttggatattgatgctggatactctgcttccaaacgctgtgattcatggtta aaggtcaagcgtgactatgtggaaggcttaggtgatagccttgacttagttccagtcggt gcatggtatggaaatggacggaaagctggatggtacagtccttttcttatggcatgctac aaccctgaaaccgaagaattccaaagtgtatgccgtgttatgtctgggctctcagatgag ttctataaagagatgaaggagttttattctggggaaaggatactgcccaagaagcctgtt tactacaaaacagatgagcaaccagaggtgtggttcaccacagaacaagtttgggagatc cgaggggcagatctcaccctatcccctgttcaccatgcggccattgggcttgtccaccca tcgcgtggcatatcggtgaggatgccgaggtacatccgctcggttccagatcggagccca gaggattgcagcacagccactgatattgcctctatgttcaaagctcagacccggaagatg gatgtcagcagagagggcccggagtag

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