Panicum virgatum (switchgrass): 120710263
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Entry
120710263 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase WAV3-like
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
VWA_3
zf-RING_11
zf-RING_2
zf-RING_5
VWA_CoxE
zf-HC5HC2H_2
zf-C3H2C3
zf-rbx1
zf-C3HC4_2
C1_1
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
120710263
NCBI-ProteinID:
XP_039851839
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Position
5K:complement(54844493..54845989)
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AA seq
498 aa
AA seq
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MASTPSRTSSRCDACRGDIGLRQASFTSECAHNFHLGCVSGAAACPVCAAKWSDTLVAVP
AGSPASPFSFASPSFGQTPSSRGRPFSMLAGRPPAKQNPFWLGHAPPAPRPSSCTVCQGA
IGRGQATVTSECKHTIHLRCISGSVCPVCSARWRDEVTVTPSQPRPLWFPLPTNFNSPPS
TPSSSPEPPMPRPPISAFNDDEPVVEPPPLDDGWEVVQEATNNGVLVLTTHCEHPAVARD
AAQENFAVLVQTKAPDAAAEASELAPLDVVTVLDVSDSMSGSKLGLLKQAMGFFIDDLGP
GDRLSIVTFSCRARRIIRLTRMTDGGKALAKDVVESLTANGSTNIGDGIRVAAEVLDGRR
HGNAVSGVILFSDGQDNHTLRQGGDGPFGGARSYADLVPQSLSARNRQRALVEGSRVRVR
HRARRGGDARHRGGGGRRLLLHPEPSGRSESRVDADRAASVDVGELYADEERRFLLLLEG
MVESSKKRDVSSSGPGRS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcacgccgagcaggaccagcagccggtgcgacgcctgccgcggcgacatcggc
ctccgccaggcctcgttcacgtcggagtgcgcccacaacttccacctcggctgcgtgtcc
ggggccgcagcctgcccggtctgcgccgcgaagtggagcgacacgctggtcgcggtccct
gccgggtcgccggcatccccattctccttcgcctcgccgtcgtttggacagacgccgtcg
tcgagggggaggccattctccatgttggccggaaggccaccggcgaagcagaatcccttc
tggctcggccatgcgccgccagcaccgcggccgtcgtcgtgcaccgtgtgccagggcgcc
atcggccgcggccaggccaccgtcacgtccgagtgcaagcacacgatccacctccgttgc
atctcgggcagcgtctgcccggtctgcagcgcgcggtggcgtgacgaggtgaccgtgacg
ccgtcgcagccacggccgttgtggtttcctctgcctaccaacttcaattcgccgccgtcc
acgcccagttcctcccccgaaccaccgatgcctcgaccgccgatcagcgcattcaatgac
gatgagccggtggtggagccgccgcctctcgacgacggctgggaagtggtccaggaagcg
acgaacaatggagtcctcgtcctcacgacgcactgcgagcacccggccgtcgcgagagac
gcggcccaggaaaacttcgcggtgctggtgcaaaccaaggcccccgacgcggcagccgag
gcgtcggagctcgcgccactcgatgtcgtcaccgtactcgatgtcagcgacagtatgtca
ggctccaagctgggccttctgaagcaggccatgggcttcttcatcgacgacctcggcccc
ggcgaccggctcagcatcgtgaccttctcgtgtcgagctcgtcgcatcatccggctcaca
cgcatgacggacggtgggaaggcattggccaaggacgtcgtggagtccctcaccgccaac
ggcagcaccaacatcggagatggcattcgcgtcgccgctgaggtactcgacggccgccgg
cacgggaacgccgtctcgggcgtcatccttttctccgacggccaggacaaccatactctg
cgacaaggcggtgatggacctttcggtggcgccaggagctacgccgaccttgtgccgcag
tccttgagcgcgcggaaccggcagcgcgcgctcgtcgaaggttcacgcgttcgggttcgg
caccgagcacgacgcggcggcgatgcacgccatcgcggaggtggcgggcggcgccttctc
cttcatccggaaccatccggtcgctccgagagccgcgtcgacgcggaccgcgccgcatcc
gtggacgtcggcgagctgtacgcggacgaggagaggcgcttcctgctgctgctggagggc
atggtggagtcgtcgaagaagagagacgtgagcagcagcggccctggtagaagttaa
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