Panicum virgatum (switchgrass): 120710467
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Entry
120710467 CDS
T07260
Name
(RefSeq) L-type lectin-domain containing receptor kinase SIT1-like
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
Lectin_legB
Pkinase
PK_Tyr_Ser-Thr
APH
Pkinase_fungal
DUF6320
DUF5305
Motif
Other DBs
NCBI-GeneID:
120710467
NCBI-ProteinID:
XP_039852086
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Position
1K:complement(43424971..43427281)
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AA seq
669 aa
AA seq
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MTHAALLLFLTLHRLRLAAAAVDQFTFDGFAGANLTLDGTAAVTADGLLRLTNGTTLLKG
HAFYPSPLRFHRDAASGGGGARSFSAALVFGIASEYADLSSPGLAFVVAKSKDFSAALQS
QYMGLANAANNGNATNHFLAVELDTIVNAEFGDMSDNHVGINVNGLVSRVAVNAGYYDDG
TGAFRNMSLLNRTAAQVWVDFDARASLVNVTMAPLELPKPRKPLLSTTVNLSAIIEGEEA
FVGFSSSTGVVSSRHYVLAWSFKMDDGPAPPLNISKLPALPVAIPKPDPSKTLEIVLPIA
SAALVLALVIAVLVIRRRWHKYAELKEDWEATFGPHRFSYKDLFHATSGFCDERLLGIGG
FGRVYRGVLPVSGVEVAVKKVSHESRQGMKEFVAEVATIGRLRHRNLVQLLGYCRRQGEL
LLVYDYMPNGSLDKFLHHRNSLILNWGQRFRIIRGVACSLLYLHEDWEQVVLHRDIKASN
VLLDAEMNGRLGDFGLARLYDHGTDPHTTHVVGTMGYLAPELGHTGRASKASDVFALGVF
MLEVACGRRAVVEDEHGDHHLLVDWVAEQWRRGTVADAVDPRLRGDFAVEEAGLVLKLSL
LCSHPLPGARPGIRQITQFLDGSAPLPELSEAHLHLGFNLQALMRNQVLNPHSSPSTVAG
NISDVPAAR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgctgcattgcttctcttcctgactctccatcgccttcgtctggcggccgcg
gcggttgaccagttcaccttcgacggcttcgccggcgcgaacctcacgctcgacggcaca
gccgcggtcaccgcggacggcctcctccggctgacgaacggcacgaccctgctcaagggc
cacgccttctacccttcccctctgcggttccaccgcgacgcggcgagcggcggcggcggc
gcgcggtccttctcggccgccctcgtgttcggcatcgccagcgagtacgccgacctgagc
agccccggcctggccttcgtcgtggccaagagcaaggacttctcggcggcgctgcagagc
cagtacatgggcctggccaacgcggccaacaacggcaacgccaccaaccacttccttgcc
gtcgagctcgacaccatcgtcaacgccgagttcggggacatgagcgacaaccacgtcggg
atcaacgtgaacggcctcgtgtcccgggtcgccgtcaacgcgggctactacgacgacggc
accggcgcgttccggaacatgagcctgctgaaccgcacagcggcgcaggtctgggtggac
ttcgacgcgcgcgcctcgctggtcaacgtcaccatggctcccctcgagctgcccaagccc
aggaagccgctgctctccaccacggtgaatctctcggcgatcatcgagggcgaagaggcc
ttcgtcggcttctcgtcgtccaccggcgtcgtctccagtcgccactacgtgctcgcctgg
agcttcaagatggacgacggcccagccccgccgctgaacatttccaagctgccagccttg
ccggtggcgatccccaagcctgatccgtcgaagacactcgagatcgtgttgccgattgcg
tctgcggcgctcgtgctggcattggtcatcgctgtcctcgtgatccgccggcggtggcac
aagtacgcggagcttaaagaggactgggaggccacgttcggcccgcaccgattctcgtac
aaggatttgttccacgcgaccagcggcttctgcgacgagcgcctgcttggcatcggcgga
ttcgggagggtgtacaggggtgtgcttcccgtgtccggcgtggaggttgcggtgaagaag
gtgtcccatgaatcgaggcaggggatgaaggagttcgtcgccgaggtggccaccattggc
cgactccggcaccgaaaccttgtccagctgcttggctactgccggcgacagggtgagctc
ctgctggtctacgattacatgcccaatggcagcctcgacaagttcctgcaccatcgaaac
agtcttattctgaattggggccagaggttcagaatcatcagaggcgtcgcgtgcagcttg
ctgtacctccacgaagactgggagcaggtggttctgcaccgggacatcaaggcgagcaac
gtgctcctcgacgccgagatgaacgggaggttaggcgacttcggcctggcgaggctgtat
gaccatggcaccgacccgcacaccacgcacgtggttggcacaatggggtacctcgcgccg
gagctcggccacaccggcagggcatccaaggcatccgacgtgttcgccttgggcgtgttc
atgctggaggtcgcctgcgggcggcgggcggtcgtggaggacgagcacggcgaccaccac
ctgctggtagactgggtggccgagcagtggcgccgagggacggtggccgacgccgtcgac
ccgcgccttcggggtgacttcgccgtggaagaagcgggcctggtgctgaagctgagcctg
ctgtgctcgcatccgctgcccggggcgcgccccggcatccggcagatcacgcagttcctg
gatgggagcgcgccgctcccggagctgtcggaggctcacctgcacctaggcttcaacctg
caggctctgatgcggaaccaggtgctcaacccacactcttcgccatcgaccgtagccggc
aacatctctgacgtccctgcagcaagatga
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