Penaeus vannamei (Pacific white shrimp): 113807228
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Entry
113807228 CDS
T06111
Name
(RefSeq) lysine-specific histone demethylase 1A-like isoform X1
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvm03036
]
113807228
Enzymes [BR:
pvm01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
113807228
Chromosome and associated proteins [BR:
pvm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
113807228
REST complex
113807228
Histone demethylases
113807228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
FAD_binding_2
Pyr_redox
HI0933_like
FAD_oxidored
AlaDh_PNT_C
Thi4
FAD_binding_3
Pyr_redox_3
Lycopene_cycl
Sec10_N
GIDA
DUF5930
COG3_N
Motif
Other DBs
NCBI-GeneID:
113807228
NCBI-ProteinID:
XP_027214242
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MESKEVTNLKRPVETAEEDDVRKGKKKRGKAEVEEEQAPSEVKEEVKSEKTEKEEADGEA
EQDDPTVGLEGASFQSRMPSDKLTTLEGSLFSDIVKSPPPTHRLFLHIRNRILQMWLENP
LQELTYEGVMANLEQPFNSESVLCARIHAYLERHGYINFGIFKRVKPLPQKKYGSIIVIG
AGIAGLAAAQQLNSFGFEVIVLEARDRVGGRIATFRKGAYIADLGAMVVTGLGGNPLNVL
SKQINMELICIKQKCPLYESNGNTVLKDKDEMVEREFNRLLEATSFLSHQLDFNYVDNRP
ISLGEALEWVINLQEKNVKEKQVNHWKTVVKLQEKLKTVLNKMHTLHGKIETLHKEHEQL
SEKRNSRNITNEFVYRVKLRELQNACKEWDQLVEQQREIEDKLQELEASSPSDVYLSSRD
RQILDWHFANLEFANATPLHNLSLKHWDQDDDFEFSGSHLTVRNGYSCVPVALSEGLDIR
LNTAVRKILYTNTGVEVTVSNARNHSNPATLKADAVLCTLPLGVLKQSVIANQNAPHTVT
FSPPLPQWKVDAISRLGFGNLNKVVLCFDRVFWDPNANLFGHVGSTTASRGELFLFWYLY
RAPVLLALVAGEAAAIMENVSDDVIVGRCIAVLKGIFGNSSVPQPKETVVTRWRADPWSR
GSYSFVSTGASGNDYDILATPISPHQANQNPQNSQNSTDVPSPPPRLFFGGEHTIRNYPA
TVHGALLSGLREAGRIADQFLGCPYAAPSSPPTNGTAKIET
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggagagtaaggaagtgaccaatctaaaacgaccggtagaaacagcagaagaagatgac
gtacggaaagggaaaaagaaaagagggaaggctgaagtggaggaggaacaggccccctct
gaggtgaaagaagaagtgaagtcggagaagacagagaaagaagaggctgacggagaagcc
gaacaggatgaccctacagttggcttggaaggagcctcgttccagagtcgcatgccctcg
gacaagctcaccaccctggagggatcgctcttctccgacatcgtgaagagcccccctccc
acccaccggctcttcctccacatcaggaacagaatcttgcaaatgtggcttgaaaatcct
ctgcaagaactgacctatgaaggcgtcatggcaaacctcgaacaacctttcaactccgag
agcgtgctgtgtgctcgcattcatgcctaccttgaacgccacgggtacatcaactttggc
atctttaagcgcgtgaagccattgccgcagaagaagtacgggagcattattgtcattggt
gccggcattgcgggcctagcagctgcgcaacaacttaattcttttggatttgaagtcatt
gtgttggaggcaagggaccgggttgggggtaggatagcaaccttccggaagggggcctac
atcgccgacctcggagcgatggtggtgacaggcctgggaggcaatcccctgaatgtcctc
tccaagcagatcaacatggaactcatctgtatcaaacagaagtgccctctgtatgagtcc
aatgggaatacggtgctaaaggataaagatgagatggttgaaagggaatttaatcgtctt
cttgaagcaaccagctttttgtctcatcagctcgatttcaattatgttgacaaccgtcct
attagtcttggagaggcactggagtgggttatcaacttgcaagaaaagaatgttaaagaa
aaacaggttaatcattggaaaacagttgtcaaattgcaagagaaactcaagactgtctta
aataagatgcacacacttcatggaaagattgaaacccttcacaaagagcatgaacagctg
agcgaaaagagaaattcccgaaatatcacaaatgaatttgtttaccgtgttaagttgcgg
gaattgcagaatgcttgcaaggagtgggaccaactggtcgaacaacaaagagagatagag
gacaaactgcaagaactggaggcatcgtcgccaagcgacgtctatctctcatcccgtgac
agacagatcttggactggcactttgctaatctcgaatttgccaatgccactcccttgcac
aacctctccctcaagcactgggatcaggacgatgactttgagttctcaggcagccacctc
acagttcgaaatggatactcgtgcgttccagtagccctcagtgaaggcctagatatccgg
ctaaacaccgcagtgcgcaaaatattatacacaaacaccggggtcgaggtcacagtatct
aatgctcgtaaccattccaatccagcgactttaaaagctgatgcagtgctgtgcacacta
cctctgggtgttttaaagcagtcagttattgccaaccagaatgctcctcacactgtcaca
ttcagccctcctttgcctcagtggaaggttgatgcgatctcgagactaggattcggaaat
ctcaataaggttgttttgtgtttcgaccgggtgttctgggatccaaacgcaaatctcttt
ggacatgtgggatccacgacagcaagcagaggtgagctctttctcttctggtatttgtac
cgtgctccagtactcctagcactggtagcaggagaagccgcagcaattatggaaaatgtc
agtgatgatgtcattgttggccgttgcattgctgtgctgaagggaatctttggcaactcc
tctgtaccacagcctaaagaaacggtagtgactagatggcgtgcggatccatggtccagg
ggctcgtactcttttgtctccacgggggcatctggcaatgactacgacatcctagccaca
cccatctctccgcaccaggccaatcagaacccacagaattcacagaactcgactgatgta
ccttctccacctccgagactgttcttcggaggggagcacaccatccgaaactatcctgcc
acggtccatggggccttgctcagtggtcttcgcgaggcaggacggattgcagatcagttc
ttgggctgtccttacgccgccccatcctcacctcccactaacggcactgccaagatcgag
acttag
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