Penaeus vannamei (Pacific white shrimp): 113815729
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Entry
113815729 CDS
T06111
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvm04040
]
113815729
Ion channels [BR:
pvm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113815729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ion_trans
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
Motif
Other DBs
NCBI-GeneID:
113815729
NCBI-ProteinID:
XP_027223551
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MSDHPLRMQPISLNVLKRPQVLFHHAVDWSWMLHRPSIALRIFHRSCHTRVVQLLLSKGA
LLHRDHHGRTPLHLAALGGHRDTISAILTIHSHTLDQTDKEGNTALHVAVRANKPETVSQ
LMSLNCKFLENLASCKPIDIAIQYKLSESALALVTHDRGPTEVLGTSSKIHGCICMALIR
TLPKVFESVLFQAIVKADVKEQAKDFYIKYNFYPLQLTPEQLDAEKIKQKNPNFRPEPLY
ACNVGHFACNGGHFRGRACDGGVRRVELLMHPLTQKFLEMKWQAYGKYIHLSNLFVYLVF
LALVTIFAVGVLGQQSFVMSNVTRVPVDNVSDITTTGEFQLHIEDTPGWMFCMAIGITVF
AVLSMMKEAFQIYYHRLKYLAEAINFVEWTMYLASICMVMPVFLGTNWHNQQYNSAALAV
FCSWFILLIYFQRFDRIGIYIVMFLEILNTLINVLLVFSVLIVAFGLAFYILMSHGGQLS
FSNVPMSMLHTFSMMLGEVDFLTIYVYPFYQESTRGDILLFPRTTFALLVIFMILMPILL
MNLLIGLAVGDIESVRKNAQLKRIAMQVEMHTELENKLPEMIIRRVNKSELVIYPNCRKG
THLMNKILSAFNFACPFSDKKGTELESADSAGDDYLWEELEGQRRRLRDISAVLDTQTKL
LRLIMQKMEIRSEADDVDEGVNLEDIMKPFPNRKFAPSSATSRRAILYRKE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcacccacttaggatgcagccaatttcgctcaacgtgctaaagaggccacag
gtgttatttcatcacgccgtcgactggtcgtggatgttgcatcgacctagcattgcactc
cgaattttccatcgttcatgccacacccgagtcgtccagctgctgttgagtaagggcgcc
ctgctgcaccgggatcaccatggcaggacaccactacacctggctgctctcgggggacac
agggacaccatcagcgccatcctcaccatacacagccacacgttggatcagacggataag
gaagggaacaccgccctacacgtggctgtgcgagcgaacaaaccggagacagtgagtcag
ctgatgagtctcaactgcaaattcctcgagaacttggcctcttgcaagcccattgacatt
gccattcagtacaagctgtctgagtcggccttggctctcgtcacgcacgatcgaggccca
acggaggtgctcgggacgtcaagcaagatccacggttgcatctgcatggccctcattcgg
actctgccaaaggtcttcgagtcagtgctcttccaggccatagtcaaggcagacgtcaag
gagcaggccaaggacttctatatcaagtacaacttctacccgctgcaactgacccctgaa
caactcgacgcagagaagatcaagcagaagaatccgaattttcgtccagagcccctgtat
gcttgcaatgtaggtcattttgcttgcaatggaggtcatttccgaggtcgcgcttgcgat
ggtggagtccggcgagtggagctcctgatgcaccccctcacccagaagttcctcgagatg
aagtggcaggcctatgggaagtacatccacctctccaacctcttcgtgtacctcgtgttc
ctggcgctggtcaccatcttcgccgtcggggtcctgggacagcagagtttcgtcatgtcc
aatgtaacgagggttcctgtggataacgtgtcggatataacgaccaccggcgagtttcag
ttacatatcgaagacacacctggctggatgttctgcatggccatcgggataactgtgttt
gccgtgttgagtatgatgaaggaggcattccagatatactaccatcgacttaagtacctg
gcagaagcgatcaacttcgtggaatggacaatgtacctggcatcgatatgtatggtgatg
cctgtgttccttggcaccaattggcacaaccagcagtacaactcggccgcccttgctgtc
ttctgctcttggttcatactcctcatttactttcagaggtttgaccggattgggatatac
attgtgatgttccttgagattctgaacacacttataaatgttcttcttgtgttctctgtt
cttatcgtcgcctttggacttgccttctatatcctgatgtcacatggaggtcagctgtcc
ttctcgaacgtgccgatgtcgatgctgcacactttctccatgatgctcggggaggtcgac
ttcttgaccatctacgtctaccccttctaccaggaaagcacccggggggacatcctgctc
ttcccacgcaccacgttcgcccttctggtaatcttcatgatcctgatgccgattctactc
atgaacctccttattggtctggctgttggggacatcgagagcgtgaggaagaatgcacag
ctgaagaggatcgctatgcaggtcgaaatgcacacagaactggagaacaaactccccgaa
atgatcatccggcgagtgaacaaaagtgaactggtgatctacccgaactgcaggaaagga
acgcacctgatgaacaagatcctcagcgcgttcaacttcgcctgtccgttcagcgacaag
aaaggaacggagctcgagtcggcggacagcgcgggcgacgactacctgtgggaggagctg
gaggggcagaggaggcgcctcagggacatctcggccgtcctcgacacgcagacgaagctc
ctgcggctcatcatgcagaaaatggagatcaggagcgaggccgatgacgtggacgagggc
gtgaacctggaggacatcatgaagccatttcccaaccgtaaattcgccccgtcgtcagcc
acctccagacgcgccatcttgtacaggaaggagtga
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