Penaeus vannamei (Pacific white shrimp): 113816012
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Entry
113816012 CDS
T06111
Name
(RefSeq) DNA topoisomerase I, mitochondrial-like isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvm03032
]
113816012
Enzymes [BR:
pvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
113816012
DNA replication proteins [BR:
pvm03032
]
Eukaryotic type
DNA Topoisomerases
113816012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
113816012
NCBI-ProteinID:
XP_027223833
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MSDAEDFDVPGGGTEALQNGMSNGISNGTSEHREHKEHKHKHKDKDREREKDKDRHRDKD
RHKSSHKDKDRDKDRHSSSHKSSHREKDRDKERSKDKERSSGSSDKDKHRDKDKERSDKD
KHRDKDKERSDKDKHRDKDKERSDKDKHRDKDKHRDKDKERSDKDRHRDKDRHHDDKKHS
SSSSSEKRDRDKDRHSSSHKSSHKDKDREKSRDKDKHREREKEREKVKTEPKEHIKTEVE
EPPPMEVTVKEEPVESEEEDKLVISEPVKEEPMEEEEDEVPLVSRARYHHNHQQEEEGDD
DDDAPLVSKQEAEDQDYMEDEDEDEDDDLPLSARKRIKEEDEDDDDKPLAIRKKVKTEPK
EKKRKKVKDEDEDEDFKPEKKKVKKEKKEKKPKAGKAAAAAPKEVGSPTKKAKKEEEPVW
KWWEETKRDDGLKWTFLEHKGPLIADPYIPLPHHVKFYYNGEAMQLSSEAEEVAGFYARM
LDHDYTSKEVFNSNFMKDWRKVMTSKEKEIITDLKKCDFRRLHAHFVQQNEERKNRSKEE
KKALKEKNEALIAEYGWCNIDGHRQRIGNFKVEPPGLFRGRGEHPKQGMLKRRIMPEDII
INCSKDSVIPKPPDGHKWKEVRADPSVTWLACWVENIQGQTKYVMLNAASKLKGEKDWQK
YETARRLHQTVDKIRENYKADFKSKEMRIRQRAVALYFIDKLALRAGNEKDEDQADTVGC
CSLRVEHITLHEEKDGKEYVVSFDFLGKDSIRYQNEVQVEKRVFKNLQLFMENKQEGDDL
FDRLNTQILNKHLNELMEGLTAKVFRTYNASRTLQEQLELLTNDDDPIPAKILSYNRANR
AVAVLCNHQRAAPKTFDKSMANLQKKIDDKKEQIDEAEKECKSLKKAAKSGGSQKEKMAH
EKKKKALERLKEQLAKLEMSATDKEENKTIALGTSKLNYLDPRISVAWCKKYGVPIEKVY
NKTQRQKFQWAIDMATAEYNFMGEPMDISRSNDCDDGGDEDYE
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgctgaggacttcgatgtgccgggaggcggcacggaagctctccagaacgga
atgtcaaatggtatctccaatggaacctcggagcaccgtgaacacaaggaacacaaacac
aagcacaaagacaaggacagggaacgcgaaaaagacaaggacaggcaccgggataaggac
aggcacaaaagctcccacaaggacaaggaccgtgataaggacagacactcttcgagtcac
aaaagttctcacagagagaaggaccgtgacaaggagaggagcaaggacaaggagcgaagc
agtggcagcagtgacaaggacaagcacagggacaaggacaaggagaggagtgacaaggac
aagcatcgtgataaggacaaagaaaggagtgacaaggataagcacagggataaggataag
gagaggagcgacaaggacaagcacagggacaaggacaaacaccgtgacaaggacaaggaa
cgtagtgataaggatagacacagagacaaggaccggcatcatgatgacaagaagcacagc
agcagcagcagtagtgagaagagagaccgagacaaggaccgtcactcatcaagccacaag
agctcacacaaggacaaagatagggagaagagcagagacaaggataaacacagagagagg
gagaaagagagagaaaaggtcaagacagaaccgaaggaacacatcaagacagaggtggag
gagccaccgcccatggaagtgactgtcaaggaggaaccagtagagtccgaggaggaagac
aaactggtgatcagtgagccagtgaaagaagagcccatggaagaggaggaggacgaggtc
cccctggtgagtagggcgcggtaccatcataatcaccagcaggaggaggagggtgatgat
gatgatgacgcgccgcttgtgagtaaacaggaggcggaggatcaggattacatggaggat
gaggatgaggatgaggatgatgacctgcccctgtctgctcgaaaacgtatcaaggaagag
gatgaagatgacgatgacaagcctctggctatcagaaagaaggtgaagacagaaccaaag
gagaagaaaaggaagaaggtgaaggatgaggatgaagacgaggacttcaagcctgaaaag
aagaaagttaaaaaggaaaagaaagagaagaagcctaaggcaggaaaagctgcagcagct
gctccaaaggaagttggatcacccaccaagaaggccaagaaagaggaggagcctgtgtgg
aagtggtgggaggagacgaagcgagacgatgggttgaagtggaccttcctcgagcataag
ggcccccttattgcagacccctatattcccctccctcatcatgtgaaattctactacaat
ggagaggccatgcagctctcttcggaggctgaggaggtggccggcttctacgccaggatg
cttgaccatgactacacttccaaagaggtgttcaacagcaacttcatgaaggattggaga
aaggttatgacatcaaaagagaaggagattatcacagacctaaaaaaatgtgacttccgc
cggttgcatgctcacttcgtccagcagaacgaagaaagaaagaaccgttctaaagaggag
aagaaggcattgaaggaaaagaacgaggctctcatagcagagtatggatggtgtaacatt
gatggccacaggcaacgtataggaaactttaaggtggaacctccaggtctgttcagagga
cgtggtgagcatcccaagcaaggcatgctcaagaggcgcatcatgccagaagatattatt
ataaactgctcaaaggattctgtgatacctaaaccaccagacggtcacaaatggaaagag
gtacgagcagatccttcggtcacatggctggcatgttgggtggagaacattcagggacaa
acaaagtatgttatgctcaacgctgcttcgaagttgaaaggcgagaaggattggcaaaaa
tatgagactgctcgcagattacaccaaactgtagacaaaattcgtgagaactacaaagca
gacttcaagagcaaagagatgcgtataagacagagagctgtagccctttatttcatagat
aagttagcccttcgtgcgggtaatgagaaggacgaagatcaagctgacactgtgggctgc
tgctcgctgagagtagaacatataactcttcatgaagagaaggatggcaaggagtatgtt
gtctcctttgactttctgggtaaagattccattcgttaccagaatgaggtgcaggtggag
aagagagtattcaagaatttgcagcttttcatggagaacaagcaagagggagatgatctc
tttgacagattaaatacgcaaattctgaacaagcatttgaacgaattgatggaagggctc
actgccaaggtcttccgtacgtacaatgcttcccgcaccttgcaagagcaactggagttg
ttaacaaatgacgatgacccaattccagccaaaattctatcctacaacagagctaaccgt
gctgtggctgtattgtgtaaccatcagcgtgcagcccccaaaacctttgacaaatccatg
gccaacttgcagaagaagattgatgacaagaaagaacagattgacgaagctgagaaagag
tgcaagagcttgaagaaggcagccaaatctggtggctctcagaaggagaagatggcccat
gagaagaagaagaaggcattggagcgcttgaaagagcagctagctaaactggagatgtcg
gccacagacaaggaggagaacaagaccattgctctcggcacgtccaagctgaactacctg
gatccccgaatttcagtggcctggtgcaagaaatatggtgttcccattgagaaggtctat
aacaagactcagcgccagaagttccaatgggcgattgacatggctacggcagagtacaac
ttcatgggcgaaccaatggacatttccaggagtaatgactgtgacgatgggggcgatgag
gattatgagtga
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