Paenibacillus vortex: PVOR_08960
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Entry
PVOR_08960 CDS
T05385
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pvo
Paenibacillus vortex
Brite
KEGG Orthology (KO) [BR:
pvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvo03021
]
PVOR_08960
Transcription machinery [BR:
pvo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PVOR_08960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Xre-like-HTH
Sigma70_ECF
HTH_24
HTH_AsnC-type
HTH_Mga
RWP-RK
HTH_Tnp_ISL3
GerE
HTH_28
HTH_10
HTH_23
HTH_11
EAP30
Motif
Other DBs
NCBI-ProteinID:
EFU42392
UniProt:
A0A2R9SYC8
LinkDB
All DBs
Position
complement(264214..264750)
AA seq
178 aa
AA seq
DB search
MEYLKQMVAVNDPGSVLNGLMESFGQDVWNYAFFLTKQREAADDISQDVFLKAFQHWNDF
QGRSSVKTWLLTITRNLSLNYLKSSYMTRVSLTGWITSKQTGPSAEKEFMDAAAVSQIWK
FVMELPPKYREVLILESHYRLPRKEMAELLGISEGTIKSRLHRARTRMEKMLKGEDVQ
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
ttggagtacctgaaacaaatggtagccgtgaacgatccgggctctgtgctaaacggcttg
atggagtccttcggtcaggacgtgtggaactatgcattcttcctgacgaaacagagagaa
gcggcagatgatatcagtcaggacgtgttcctgaaggcctttcagcattggaatgatttt
cagggcagaagctctgtgaagacctggctcctgaccatcacccgcaacctatccttgaat
tatctcaagtcttcttatatgaccagggtgtccttaaccggctggataacctccaagcaa
accggaccttccgcggaaaaagaattcatggacgctgccgcagtctcgcagatatggaaa
ttcgtcatggagctgcctccgaaataccgggaggtgctcattctcgaatcccactaccgg
ctgccgcgaaaagagatggccgaactgctcggaatttccgaaggcacgatcaaatccaga
ctacaccgggctcgcacccgaatggaaaagatgttgaaaggggaggatgtccaatga
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integrated database retrieval system
