Pteropus vampyrus (large flying fox): 105305557
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Entry
105305557 CDS
T07815
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03013
Nucleocytoplasmic transport
pvp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105305557 (UPF3B)
03015 mRNA surveillance pathway
105305557 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvp03019
]
105305557 (UPF3B)
Messenger RNA biogenesis [BR:
pvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105305557 (UPF3B)
mRNA cycle factors
P-body specific factors
105305557 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
105305557
NCBI-ProteinID:
XP_011378516
UniProt:
A0A6P3RB96
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MKEEKDHRPKEKRVTLLTPPGATGSGGGASGDSTKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDRLKDEPKIKLLKKPEKGDEKELDKREKAKKLDKENLNDER
ASGQSCTLPKRSDGELKDEKPKRPEDESGRDYRERERDYERDQERILRERERLKRQEEER
RRQKERYEKEKAFKRKEEDMKREKEALRDKGRKTESTEVGSEKTEKKEEVVKRDRIRNKD
RPAMQLYQPGARSRNRLCAPEDSTKSGDSAIEKKQESGIRKEGGEE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggaccatagacctaaggagaaacgagtaaccctgttgactcccccc
ggggccacaggtagcggcggtggggcttcgggggacagcaccaaaggagaagataagcag
gatcggaacaaggagaagaaagaggcgctgagcaaggtggtaattcgaagattacctcct
acgttgaccaaggagcagcttcaggaacatcttcagcctatgcctgagcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaggaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagataccaaagttgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgctgcagataatgagaaaatgacatctactccagagaca
ctactagaggaaatagaagctaaaaatagagaattaatagctaaaaagacaaccccacta
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagggaagaaaggaggagg
cgagaaatagaaagaaaaagacaacgagaagaagagaggaggaagtggaaagaagaggag
aaacgaaaaaggaaagatatagaaaagctaaagaagatagacagggttccagaaagggac
agattaaaggatgaaccaaagattaagctgcttaagaagccagaaaagggagatgaaaag
gaattggacaaaagagaaaaggccaagaaattggataaagagaatctgaatgatgaaaga
gccagtgggcagagttgtacattgcccaaacgttctgatggtgaacttaaagatgaaaag
cctaagagacctgaagatgaaagtggcagagactacagggagagagaacgagattatgaa
cgtgatcaagaacggattcttcgggaaagagagagactgaagcggcaagaagaagagcgc
cggaggcagaaggagcgctatgagaaagagaaggcttttaaaagaaaggaggaagacatg
aaaagagagaaagaagcacttcgggataaaggaaggaagactgaaagtacagaagtaggc
tcagaaaaaactgaaaagaaagaagaagtggttaagagggatcgcataagaaacaaggat
cgcccggcaatgcagctttaccaaccaggagctcgaagccgaaatcgactctgtgcccct
gaagacagcaccaagtccggagattcagcaatagaaaaaaaacaggaaagtggtattaga
aaagaaggaggagaggagtga
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