Phaseolus vulgaris (common bean): PHAVU_002G227900g
Help
Entry
PHAVU_002G227900g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03022
Basal transcription factors
pvu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PHAVU_002G227900g
09124 Replication and repair
03420 Nucleotide excision repair
PHAVU_002G227900g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
PHAVU_002G227900g
03400 DNA repair and recombination proteins [BR:
pvu03400
]
PHAVU_002G227900g
Transcription machinery [BR:
pvu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PHAVU_002G227900g
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PHAVU_002G227900g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
MetRS-N
Motif
Other DBs
NCBI-GeneID:
18638821
NCBI-ProteinID:
XP_007159317
UniProt:
V7CQV4
LinkDB
All DBs
Position
2:39293287..39298672
Genome browser
AA seq
451 aa
AA seq
DB search
MPEVRIIAKNFMDMVASMPAMKLDKLYENGFICEAILRSLPPLAKKYVIQMLQIDVPVAA
KLLEEWVLPDGVSKHRVAVDRLVQLRVFLEAVDRKNEKTYKVNPTYQRSLQKLLVQGGTL
PRESMPSNITVRLPTLENLEAYALEQWEWFLLQLISPAQADKPLNISSSLMKVFQRRLLS
QRDKEAPKLTESGFQFLLMDTNAQLWYIIREYISNSEERGVDAADLISFMLELSFHVIGE
AYSISTLTDFQRSIINDLADLGLVKLQQGRKGSWFIPTKLATNLSMSLADSSSRKQGFVV
VETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNAFENGITADQIVTFI
QQNAHPRVAERIPCVPENVTDQIRLWEADLNRVEMTDAYYYDEFPSRDVFEGACDCAREW
NGLLWEDSKKMHMVVKTEVHPYVRDFLRRQK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccagaggttaggatcattgccaaaaatttcatggacatggtggcatccatgcccgcc
atgaagctagataaactctatgagaatggattcatctgtgaggctattctcaggtctctt
ccgcctcttgcgaagaaatacgtgatacagatgctacaaattgatgtgccagtggcagct
aagttgttggaggagtgggtgcttccggatggagtttcaaagcacagagtagccgttgat
agactggttcagttgcgagttttccttgaagctgttgacaggaagaatgaaaagacatac
aaagttaatccaacatatcagagaagtctccaaaagcttttagtacaaggtggaactttg
ccaagggaatcaatgccttccaatattactgtgaggcttccaaccttagaaaatcttgag
gcttatgctctagagcaatgggagtggttcttattgcaacttataagcccagctcaggct
gataagcccttaaatattagctcttctttgatgaaagttttccagcgacgtctcctgagt
caaagagacaaagaagctccaaaattaactgaaagtggtttccagtttttgcttatggat
acaaatgcccagctttggtatatcatcagagaatatatctctaattctgaggagagaggt
gttgatgcggctgacttgatctcattcatgctggaacttagctttcatgtcatcggggag
gcatatagtataagcacattaactgattttcagaggagcataattaatgacctagcagac
cttggactggttaaacttcagcagggaaggaaaggaagttggtttatacctacaaaattg
gcaaccaatctttcaatgagcttggctgattcatcgtctagaaaacagggatttgtggtt
gtggaaacaaattttagagtttatgcttactcgacttctaagttacattgtgagatattg
cggctattctcaagggtagagtatcaacttccaaatcttattgttggagctattacaaaa
gaaagcttgtataatgcttttgaaaatggcattacagcagatcagatagtcactttcatt
cagcaaaatgctcatcctcgtgttgcggagagaataccatgtgttcctgaaaatgtcaca
gatcagattaggctgtgggaagcagatctaaacagagttgagatgacagatgcatattat
tacgatgagttcccttccagagatgtatttgaaggtgcatgtgactgtgctagagaatgg
aatggtttgttgtgggaagattcaaagaaaatgcatatggtggttaagactgaggtacat
ccatatgtacgagattttttacgccgtcaaaagtag
DBGET
integrated database retrieval system
