Phaseolus vulgaris (common bean): PHAVU_004G159000g
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Entry
PHAVU_004G159000g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PHAVU_004G159000g
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvu01009
]
PHAVU_004G159000g
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
PHAVU_004G159000g
03036 Chromosome and associated proteins [BR:
pvu03036
]
PHAVU_004G159000g
Protein phosphatases and associated proteins [BR:
pvu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
PHAVU_004G159000g
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
PHAVU_004G159000g
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
PHAVU_004G159000g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
HEAT_EZ
CLASP_N
Cnd1
TAF6_C
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
18633206
NCBI-ProteinID:
XP_007152779
UniProt:
V7C5Z4
LinkDB
All DBs
Position
4:44063346..44073000
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AA seq
587 aa
AA seq
DB search
MAMVDQPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCTVEETCVRDKSVESLCRIGAQMKEN
DLVEHFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEVVKTELRAIYGQLCQDDMPMVR
RSAATNLGKFAATVEAPHLKSDVMSVFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDPTRSELVPAYVRLLRDNEAEVRIAA
AGKVTKFSRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNIKRLAEEFGPDWAMQHIIPQV
LDMVTDPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVINASKDRVPNIKFNVAKVLQS
LIPIIDQSVVESSIRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggtggaccagcctctgtatccgattgccgtcttgatcgacgagctgaagaac
gaggacattcagctgcgactgaactcgatccgacggctatccacgatcgcgcgcgcgctc
ggcgaggagcgcacgcggaaggagctgattccgtttctcagcgagaacaacgacgatgac
gatgaagtgcttctcgcaatggccgaggagttgggcgttttcattccctacgtcggaggc
gtggaacacgccaacgtgcttcttcctccgctggagacgctctgcaccgttgaggaaact
tgcgtcagagacaaatcggtggagtcgctgtgtaggattggagctcagatgaaggagaat
gatttggttgaacacttcattcctctagttaagaggctggctgccggtgagtggttcaca
gcacgagtttcatcgtgcggtttgttccatattgcttaccctagtgcgccggaggtggtg
aagactgaactgagagccatatatggccagctatgtcaagatgatatgcccatggttagg
agatctgctgccacaaacttgggaaagtttgctgccactgttgaagctcctcacttgaaa
tcagacgtcatgtctgtgtttgaggatcttacacaggatgatcaagattctgttcggctg
cttgctgttgagggttgtgcagctctaggaaaattgttggaacctcaggattgtgtggca
catattcttcctgtcatagtcaatttttctcaggacaagtcatggcgtgttcgttacatg
gttgcaaatcaactatatgagctatgtgaagctgttggtcctgatcccactaggtcagaa
ttggttcctgcctatgttaggctgctgcgtgacaatgaggctgaagtacgtatcgctgct
gctgggaaagtaactaagttctcccgcatactaaatcctgaacttgccattcagcatatt
ctaccctgtgtgaaggagctatcaagcgattcatctcaacatgttcgctctgcattggct
tccgttataatgggaatggcaccagtgttggggaaggatgcaacaattgagcaacttctg
cctattttcctttctcttttgaaagacgaatttcctgatgtaaggctaaatattatcagc
aagcttgatcaagtgaatcaggttattggtatcgatttgttatctcagtctctgttgcca
gctatagttgagcttgctgaggatcggcactggagagttcgacttgctatcatagaatat
atacccttactggccagccaattgggtgtaggcttttttgatgataagctcggtgctctt
tgcatgcaatggctaaaggacaaggtatactcaatccgtgacgcggccgcaaataatatc
aaacgcttagcagaagaatttggaccggattgggcaatgcaacacattattccccaggtt
ttggacatggttactgatccacattatctgtatcggatgacgatccttcaagcaatttct
ctactggctccagttttgggctcggagattacttcttcaaaacttctccctctggtcatt
aatgcatcaaaagatagggtacccaatatcaaatttaatgtagccaaagtgttgcagtct
ctcatcccaattattgatcagtctgttgttgagagtagcatccgtccctgtctggttgag
ctgagtgaggatccagatgttgatgtcaggttttttgcctctcaagcactacaatctagt
gatcaagtcaaaatgtctagctag
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