KEGG   Phaseolus vulgaris (common bean): PHAVU_009G115300g
Entry
PHAVU_009G115300g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03082  ATP-dependent chromatin remodeling
pvu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    PHAVU_009G115300g
   03083 Polycomb repressive complex
    PHAVU_009G115300g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvu03036]
    PHAVU_009G115300g
Enzymes [BR:pvu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     PHAVU_009G115300g
Chromosome and associated proteins [BR:pvu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     PHAVU_009G115300g
   HDAC complexes
    Sin3A-HDAC complex
     PHAVU_009G115300g
    BRAF-HDAC complex
     PHAVU_009G115300g
    REST complex
     PHAVU_009G115300g
    SHIP complex
     PHAVU_009G115300g
    MiDAC complex
     PHAVU_009G115300g
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     PHAVU_009G115300g
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    PHAVU_009G115300g
  Chromatin remodeling factors
   NuRD complex
    PHAVU_009G115300g
SSDB
Motif
Pfam: Hist_deacetyl GCH_III
Other DBs
NCBI-GeneID: 18619848
NCBI-ProteinID: XP_007137295
UniProt: V7AUN9
LinkDB
Position
9:17283966..17295362
AA seq 498 aa
MDSGGNSLPSAPDAVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VHKPFPARDRDLCRFHADDYVAFLRSITPETQQDHLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHDQCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGI
DDESYHFLFKPLIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPEHEYYEYFGPDYTLHVAPSNMEN
KNSRYLLEEIQSKLLENLSKLQHAPSVQFQERPPDSDLGEADEDHDNGDETWDPDSDMDV
DVERGLVPSRVKKEIVEPQLNDPDDQRRSGEHLRDSDTAVAETCMKALDISSQKADEDNV
KVEHNTVNDLTKETGLKC
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggattccggcggcaattctttaccgtctgcacctgatgcggttaagagaaaggtttgc
tatttctatgatccagaggttgggaattactattatggtcaaggtcaccctatgaagcca
catcgtatacggatgacacatgctcttcttgctcattatggattgcttcagcacatgcag
gtccataagccatttcctgctagagatcgggatctttgtcgttttcacgctgatgattat
gttgcattccttcgaagcataactcctgaaacacagcaggatcatctgaggcaactcaaa
cgctttaatgttggtgaagattgtcctgtttttgatggcctctactctttctgtcaaact
tatgcaggggggtcagttgggggtgctgtcaagttaaatcatgaccaatgtgatattgct
gtcaactgggctggtgggttgcatcatgccaagaagtgtgaggcttctggattttgctat
gttaatgatatagtcctcgcaatcttagaacttcttaaacaacatgagcgtgttctgtac
gtggatattgatatccaccatggagatggtgtggaggaagcattctatactactgacaga
gtcatgactgtttcttttcataaattcggagactattttcctggtactggggatgtacgt
gatattggatatggaaaaggaaaatactactctcttaatgttccacttgatgatggcatt
gatgatgagagttatcatttcttgttcaaaccattaattggcaaagtaatggaagtgttc
agacctggtgcagtagttctccaatgcggtgctgattctctatctggagaccgattggga
tgtttcaatctttcaattaggggacatgcagagtgtgtcaaatacatgagatcattcaac
gtgcccctcttgctactaggtggtggtggctacaccattcggaatgttgctcgatgttgg
tgctatgagacaggagttgctcttggaatagaagttgatgacaaaatgccagaacatgag
tattatgaatattttggtccagattataccctccatgttgccccaagtaacatggaaaac
aagaattcccgttatttacttgaagaaattcaatctaagctacttgagaatctttccaag
ctgcagcatgctcctagtgtccaatttcaggaaaggcctccggattctgatcttggagag
gcagatgaagatcatgacaatggagatgagacatgggatccagattcagacatggacgtt
gatgttgaacgtgggcttgtaccaagcagagtaaagaaagaaatagttgaaccgcaactc
aatgatccggatgaccaaagaagaagtggggagcatttgagagactctgatactgcagtt
gctgaaacttgtatgaaggctctagatatttcttctcagaaagctgatgaagataatgtg
aaagttgaacacaatactgtgaatgatttgaccaaagagacgggcctaaagtgctaa

DBGET integrated database retrieval system