Phaseolus vulgaris (common bean): PHAVU_009G115300g
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Entry
PHAVU_009G115300g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03082
ATP-dependent chromatin remodeling
pvu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PHAVU_009G115300g
03083 Polycomb repressive complex
PHAVU_009G115300g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvu03036
]
PHAVU_009G115300g
Enzymes [BR:
pvu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
PHAVU_009G115300g
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
PHAVU_009G115300g
HDAC complexes
Sin3A-HDAC complex
PHAVU_009G115300g
BRAF-HDAC complex
PHAVU_009G115300g
REST complex
PHAVU_009G115300g
SHIP complex
PHAVU_009G115300g
MiDAC complex
PHAVU_009G115300g
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
PHAVU_009G115300g
Heterochromatin formation proteins
Other heterochromatin formation proteins
PHAVU_009G115300g
Chromatin remodeling factors
NuRD complex
PHAVU_009G115300g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
GCH_III
Motif
Other DBs
NCBI-GeneID:
18619848
NCBI-ProteinID:
XP_007137295
UniProt:
V7AUN9
LinkDB
All DBs
Position
9:17283966..17295362
Genome browser
AA seq
498 aa
AA seq
DB search
MDSGGNSLPSAPDAVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VHKPFPARDRDLCRFHADDYVAFLRSITPETQQDHLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHDQCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGI
DDESYHFLFKPLIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPEHEYYEYFGPDYTLHVAPSNMEN
KNSRYLLEEIQSKLLENLSKLQHAPSVQFQERPPDSDLGEADEDHDNGDETWDPDSDMDV
DVERGLVPSRVKKEIVEPQLNDPDDQRRSGEHLRDSDTAVAETCMKALDISSQKADEDNV
KVEHNTVNDLTKETGLKC
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggattccggcggcaattctttaccgtctgcacctgatgcggttaagagaaaggtttgc
tatttctatgatccagaggttgggaattactattatggtcaaggtcaccctatgaagcca
catcgtatacggatgacacatgctcttcttgctcattatggattgcttcagcacatgcag
gtccataagccatttcctgctagagatcgggatctttgtcgttttcacgctgatgattat
gttgcattccttcgaagcataactcctgaaacacagcaggatcatctgaggcaactcaaa
cgctttaatgttggtgaagattgtcctgtttttgatggcctctactctttctgtcaaact
tatgcaggggggtcagttgggggtgctgtcaagttaaatcatgaccaatgtgatattgct
gtcaactgggctggtgggttgcatcatgccaagaagtgtgaggcttctggattttgctat
gttaatgatatagtcctcgcaatcttagaacttcttaaacaacatgagcgtgttctgtac
gtggatattgatatccaccatggagatggtgtggaggaagcattctatactactgacaga
gtcatgactgtttcttttcataaattcggagactattttcctggtactggggatgtacgt
gatattggatatggaaaaggaaaatactactctcttaatgttccacttgatgatggcatt
gatgatgagagttatcatttcttgttcaaaccattaattggcaaagtaatggaagtgttc
agacctggtgcagtagttctccaatgcggtgctgattctctatctggagaccgattggga
tgtttcaatctttcaattaggggacatgcagagtgtgtcaaatacatgagatcattcaac
gtgcccctcttgctactaggtggtggtggctacaccattcggaatgttgctcgatgttgg
tgctatgagacaggagttgctcttggaatagaagttgatgacaaaatgccagaacatgag
tattatgaatattttggtccagattataccctccatgttgccccaagtaacatggaaaac
aagaattcccgttatttacttgaagaaattcaatctaagctacttgagaatctttccaag
ctgcagcatgctcctagtgtccaatttcaggaaaggcctccggattctgatcttggagag
gcagatgaagatcatgacaatggagatgagacatgggatccagattcagacatggacgtt
gatgttgaacgtgggcttgtaccaagcagagtaaagaaagaaatagttgaaccgcaactc
aatgatccggatgaccaaagaagaagtggggagcatttgagagactctgatactgcagtt
gctgaaacttgtatgaaggctctagatatttcttctcagaaagctgatgaagataatgtg
aaagttgaacacaatactgtgaatgatttgaccaaagagacgggcctaaagtgctaa
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