Patella vulgata (common limpet): 126815235
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Entry
126815235 CDS
T09576
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
126815235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvul03036
]
126815235
Chromosome and associated proteins [BR:
pvul03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
126815235
REST complex
126815235
Heterochromatin formation proteins
Other heterochromatin formation proteins
126815235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
126815235
NCBI-ProteinID:
XP_050396752
LinkDB
All DBs
Position
3:40629442..40673442
Genome browser
AA seq
1347 aa
AA seq
DB search
MNMNRRIEDQHRVNPSEPFQRGVIAPTQRFNPDVPENLSRNIPYNMPGYSVSQGGHHPPP
VHHPLTGVPAPSQPHPPQPAVQPPQMPSQQMPPISIPEGRNAFENTSQHALQRIFPMDAE
SHNAQVQGQQQQFQRLKVEDALSYLDQVKLQFGNHPQVYNDFLDIMKEFKSQTIDTPGVI
NRVSNLFKGHPDLIVGFNTFLPPGYKIEVQSEMINVHQPGQQVVSISQSNVLQLASATPM
LHQQNNASQSQNNSSAASHHSYHQSPRHNPEPTPPSSQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQHNNNNNQQQQAGQPVEFNHAINYVNKIKNRFQGQPEIYKQFLEILHTYQKEQR
NLKEGLVSSTYKPLTEAEVYSQVAKLFQNQEDLLAEFGQFLPDANGSSSFVNSYASIFTH
AVVSHNDSSALGVRNDHSSTVKKPGFNNKNQSNKSSQLKRPMPGSQIPAKKPKTSSLKDV
SLAEAGKYGTLNEYAFFDKVRKALKHHEVYDNFLRCLVLFNQEVISRNELVQLVQNFLGK
YPELLKWFKDFLGCKESGGTTEAIPQPATAKERISGELLMEIDFATCKRYGASYRALPKS
YPQPKCSGRTQLCREVLNDTWVSFPSWSEDSTFVTSRKTQYEEHIYRCEDERFELDVVIE
ANLSTIRALEGVNKKLSRMTPEEQAKFRLDNSLGGSSEVLHRRAIQRIYGDKAPEIIDGM
KKNPCVAVPLVLRRLKAKEEEWRESQRGFNKIWREQNEKYYLKSLDHMGINFKQNDIKAI
RSKALLNEIETIYDEKQEQILEGQNENSSPHLSFVYKERSMIDDAANLIIHHMKRQTGIH
KEDKTKIKQLLNHFIPDMFFSPRGELSDDEGDKDEDMETDDYERTEIKKPETSSRKEDKT
PPPSVADTTTVDKKPEIKKEPGTDDKQQQLPPLVNGVNTDESDDDDEKCSLFFTNNNWYL
FFRLHQLLCERLHRIYTLTQKIVQEDCRKERKDSTAIALRLKTPFEVEPEDYYSYFLEMI
KNLLDGHMESSSYEDQLREMFGIQAYIAFTMDKLVQNLVRQLQHIVTDETCQKVMDLFIE
EQKNGATGGRLATQHQRTLVESSFQRRAEQLLSEENCYKIVIFKKECKLTLELLDTEHDQ
GDDPVEVEKWSEYVEQYVAQDDTISEELKDQLTKKPVFLPRIVRQSRQHNKNKTRGEEEE
KEKDKDSDTKEEATGPLKPKTEDMDIMDSTGCKFNVNSFKMVYVVNSESYLYKRMALKKA
KESHKRVSLKLHEKFMTKVNKWRKENVTAELEAACSQWLLGKGEGLHACKTTCNKIYFPD
KSPYYQYNKYSVEYFEANNASKPDIEK
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaatcgtcgcattgaagatcagcatcgtgttaatcccagtgaaccatttcag
cgtggtgtaatagcacctactcaaagatttaatcctgatgttcctgagaatttatcacgt
aatataccatataatatgccaggatattcagttagtcaaggaggtcatcatcctccccct
gtacatcatccattaactggtgtaccggccccgtcgcaacctcatcccccacaacctgct
gtacaacctccacagatgccatcacaacagatgccaccgataagtattccagaaggcaga
aatgcatttgaaaacaccagtcaacatgctttacaaagaatatttcctatggatgctgag
tcccataatgctcaggtgcagggtcagcagcaacagtttcaaaggttaaaggttgaagat
gctctttcgtacttagatcaagttaaactacagtttggtaatcatccgcaagtttataac
gactttctcgacataatgaaggagtttaaatctcaaactattgatactcccggggtaata
aatcgtgtatctaacttatttaaaggccatcctgatctaatagtaggatttaatacattt
ctaccacctggttataagattgaagtacaatcagaaatgattaatgtacatcaaccagga
caacaagttgtatctatatcacagagtaatgtcctccaattagcctctgctacaccaatg
cttcatcagcagaataatgctagtcagagtcaaaataactcatctgctgcttctcatcat
tcatatcatcaatcacctcgtcacaatcctgaacctacacccccatcttcacaacaacag
caacagcagcagcagcagcaacaacagcagcagcaacaacagcaacaacaacaacaacag
caacaacagcaacaacaacaacacaataataataacaatcaacagcaacaagctggtcaa
cccgttgaatttaatcacgcaatcaactatgtcaataaaatcaagaatcgatttcaaggt
caaccagaaatctacaaacagtttttagagattctgcatacgtatcaaaaagaacagaga
aatttaaaggagggtttagtttcatcaacgtataaacctttaacagaagcagaggtctac
tctcaagtagctaaattatttcaaaatcaagaagatttattggcagaattcggtcagttc
ttacccgatgccaatggttcatcatcgtttgttaattcttatgctagtatatttactcat
gctgtggtaagtcataatgattcatcagcactgggtgtaaggaatgaccattcttcaaca
gttaaaaaacctggttttaataacaagaatcagtcaaataaaagtagtcaattaaaacgt
cccatgcctggttcacagatacctgctaagaaacctaaaacaagtagtttaaaagatgtg
tcattagcagaagctggtaaatatggtacgctgaatgaatatgcattttttgacaaagta
cgcaaagctttaaaacaccatgaagtatatgataactttttacgctgtctagttctcttt
aatcaggaagttatctcacgaaatgaactagtccaactagttcaaaattttctaggaaaa
tatccagagttattaaaatggtttaaagattttcttggttgtaaagaatctggaggtaca
acagaagccattccacaaccagctacagctaaagaaagaatcagtggtgaattattaatg
gaaatagattttgctacttgtaagagatatggagcaagttacagagctttacctaaatct
tacccacaaccaaaatgttccggtagaacacagctttgtcgtgaggtattaaatgataca
tgggtgtcgtttccatcctggtctgaagattctacatttgtaacatcacgtaaaacacaa
tacgaagaacatatatatcgatgtgaagatgaaagatttgagcttgatgttgtgatagaa
gctaatttatctactataagggcattagagggtgtgaataaaaaattaagtcgtatgact
cccgaagaacaagccaagttccgcttagataattcattaggtggatcatctgaagtctta
cacagacgcgcaatacaaagaatatatggcgacaaagctccagaaattatagatggtatg
aagaaaaatccatgtgtagctgttccattagttctgagacgtttaaaagctaaagaagaa
gaatggcgagagtctcagagaggatttaataaaatctggcgggaacagaatgagaaatat
tacctcaaatcattagatcacatgggaatcaattttaaacaaaatgacatcaaagccatc
cgctcaaaggcattattaaatgaaatagagactatttatgatgagaaacaagaacagata
ttagagggtcaaaatgaaaactccagtcctcacctatcatttgtatataaagaaagaagt
atgatagatgatgcagctaatcttataatacatcatatgaaacgacaaacaggtatacat
aaagaagataaaacaaaaattaaacaattattaaatcattttataccagacatgtttttc
tctccacgtggtgaattaagtgatgatgaaggcgataaagatgaagatatggagaccgat
gattatgagagaactgagataaagaaaccagaaacaagtagtagaaaagaagataaaact
ccaccaccatcagtagcagacacaacaacagttgataaaaaacctgaaataaagaaagaa
cctggtactgatgataaacaacaacaattaccaccattggttaatggtgttaatactgat
gaatctgatgatgatgatgaaaaatgttctctgtttttcaccaataataactggtatctg
tttttccgtttgcatcaattattatgtgaacgcctgcatagaatttatacgttgacccag
aaaatagtacaagaagattgtcggaaggaacgtaaagattctactgctatagcactacga
ttaaaaacaccttttgaagtagaacctgaagactattattcctactttctagaaatgatt
aaaaatttattagatggtcacatggaatctagttcgtatgaagatcaactacgtgaaatg
tttggtatacaggcttatattgcctttactatggataaactcgtacaaaatcttgttaga
cagctacaacatatagtaactgatgaaacctgtcagaaagtcatggatttatttattgaa
gaacagaaaaatggtgccacaggtggtcgcttagcaacacaacatcagagaactttagta
gaatcatcatttcaacgcagagcagaacaacttctttcagaagaaaattgttataaaata
gttatttttaagaaagagtgtaaattaactctagaattattagatacagaacatgatcaa
ggtgatgatccggtagaagtagaaaaatggtccgagtatgttgaacaatatgtagcacag
gatgatacaatatcagaagagcttaaagatcaacttaccaaaaaacctgtctttttaccc
agaattgttcgacagtcaaggcagcataacaagaataaaacgcgtggtgaagaggaagaa
aaagagaaagataaagacagtgatactaaagaagaagcaactggaccccttaaacctaaa
actgaagatatggatattatggacagtacagggtgtaaatttaatgtgaattcttttaaa
atggtgtatgtagtgaacagtgaaagctatctgtataaacgaatggcactaaaaaaagcc
aaagagtcccataaacgagtgtcgttaaagttacatgaaaaattcatgacaaaagtgaat
aaatggagaaaggaaaatgtgactgccgaactagaagcagcttgttctcagtggctgctg
ggtaaaggtgaaggacttcatgcgtgtaaaacaacgtgtaataaaatttactttccggac
aaatctccctactaccaatataacaaatattctgtggaatattttgaagcaaacaacgcc
tcgaaacctgacatagaaaaataa
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