Patella vulgata (common limpet): 126818447
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Entry
126818447 CDS
T09576
Name
(RefSeq) probable histone deacetylase 1-B isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03082
ATP-dependent chromatin remodeling
pvul03083
Polycomb repressive complex
pvul04330
Notch signaling pathway
pvul04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126818447
03083 Polycomb repressive complex
126818447
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
126818447
04350 TGF-beta signaling pathway
126818447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvul03036
]
126818447
Enzymes [BR:
pvul01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
126818447
Chromosome and associated proteins [BR:
pvul03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
126818447
HDAC complexes
Sin3A-HDAC complex
126818447
BRAF-HDAC complex
126818447
REST complex
126818447
SHIP complex
126818447
MiDAC complex
126818447
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
126818447
Heterochromatin formation proteins
Other heterochromatin formation proteins
126818447
Chromatin remodeling factors
NuRD complex
126818447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
126818447
NCBI-ProteinID:
XP_050401814
EnsemblRapid:
ENSPVUG00005020994
LinkDB
All DBs
Position
4:complement(55662266..55674520)
Genome browser
AA seq
522 aa
AA seq
DB search
MASSQAHKKKCCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLVLNYGLYRKMEIYRPHKAT
AEEITKFHSDDYIKFLRCIRPDNMSEYNKQMQRFNVGEDCPVFDGMYEFCQLSTGGSVAG
AVKLNKQAADIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMSVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDDNYETI
FKPVMTKVMDMYQPSALVLQCGADSLSGDRLGCFNLTLKGHGKCVEFMKKWNLPILLLGG
GGYTIRNVARCWTYETSIALNVEIANELPYNDYFEYYGPDFKLHISPSNMANQNTGEYMD
KIKTRLFENLRMLPHAPGVQMQPIPEDAVNEESDDDDKDNPDERISIRASDKRIACEEEF
SDSEDEGEGGRRDRQNYKPKAKRARTDEEKKAEAEKADAKEDKKDIKKEVTNLDKDEKAT
EKSDEKSDSTEKKDEKPEAKPEGPTEAMDADAPTQEPAKMEH
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtctcaagcccataagaagaaatgctgctattactacgacggagacatcggg
aattattactatggccaaggacatcctatgaaaccacacagaataaggatgacacacaac
ttggttttgaattatggtctctataggaaaatggagatttatcgtccacataaagccaca
gcagaagagattaccaagtttcacagtgatgactatataaagtttttacgatgtatacgg
ccagacaatatgtccgaatataacaaacagatgcaaagatttaatgttggtgaagattgt
cctgtttttgatggaatgtacgaattttgtcaactgtctactggggggtctgttgctggg
gcagtaaaactaaataaacaagctgcagatattgcagttaattgggctggtggtcttcat
catgctaaaaaatctgaagcttctgggttctgttatgtaaatgatattgttttggcaata
ttagaacttttaaaatatcatcagcgggtgttatatattgatattgatatacatcatggt
gatggtgtggaagaagctttttacacaacagatagagttatgtcagtctcatttcataaa
tatggtgaatatttccctggtactggtgatcttagggatattggagcaggtaaaggaaaa
tattatgcagttaatttcccactcagagatggtatagatgatgataattatgaaacaata
tttaaacctgttatgactaaagttatggatatgtatcaacctagtgctctagttttacaa
tgtggtgctgattctttatctggtgatagattaggttgttttaatcttactctaaaaggt
catggtaaatgtgtagaatttatgaagaaatggaatttacctatattattacttggtggt
ggaggttatactattagaaacgttgctagatgttggacatatgaaacatctatagctctt
aatgttgaaattgcaaatgagctaccttataatgattattttgagtattatggtccagat
tttaaacttcatattagtccatctaatatggctaatcaaaatacaggagaatatatggat
aagataaaaacgagattatttgagaatttaagaatgttaccacatgctcctggagtacag
atgcagccaataccagaagatgctgtaaatgaagaaagtgatgatgatgataaagataat
ccagatgaaagaatatctattcgagctagtgataaaagaattgcttgtgaagaggaattt
tccgatagtgaagatgaaggagaaggtggacgacgagatcgacagaattataaacctaaa
gctaaacgggctagaacagacgaagaaaagaaagctgaagctgaaaaagcagatgcaaag
gaggataaaaaagatattaagaaagaagtaacgaatttggataaagatgagaaagcaaca
gaaaaaagtgacgagaaaagtgattcaacagaaaagaaagatgaaaagccagaggcaaaa
ccagaaggtcccacagaagccatggatgctgatgcacctacacaggaacctgccaagatg
gaacattaa
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