Pistacia vera (pistachio): 116113806
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Entry
116113806 CDS
T07386
Name
(RefSeq) ubiquitin receptor RAD23c-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03420
Nucleotide excision repair
pvy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116113806
09124 Replication and repair
03420 Nucleotide excision repair
116113806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvy03051
]
116113806
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116113806
Proteasome [BR:
pvy03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
116113806
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
116113806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
Dsc3_N
Rad60-SLD_2
Ubiquitin_5
Crinkler
UBA_3
TECR_N
Motif
Other DBs
NCBI-GeneID:
116113806
NCBI-ProteinID:
XP_031255829
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MKVFVKTLKGTHFEIEVKPEDKVADVKKNIECVQGTDVYPAAQLMLIHQGKVLKDDTTLE
ENKIAENSFVVVMLTKSKVSSSGASTASAAPANPAQPTTTPPPVSAQPSTTSQIPAPAVA
MPQAVPESTPAVAPPVSSSGSDVYGQAASNLVAGSNLETMVQQILDMGGGSWDRETVLGA
LRAAYNNPERAVEYLYSGIPEQTGVPPVSRVPAGGQPVNPPAQVQQPAAAAAATVSGPNA
NPLDLFPQGLPNMGSNASAGTLDFLRNSQQFQALRGMVQANPQILQPMLQELGKQNPGLM
RLIQEHQADFLRLINEPVEGGEGNILGQLASAMPQAVTVTPQEREAIERLEAMGFDRALV
LEVFFACNKDEELAANYLLDHMHEFED
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttcgttaagactttgaagggaactcacttcgagatcgaagtgaagcccgaa
gacaaggttgctgatgtcaaaaaaaatatagaatgtgtacaaggcacagatgtttatccg
gctgcacaactgatgcttattcatcagggaaaagttcttaaggatgacacaaccctggaa
gaaaacaaaattgctgaaaacagttttgttgttgtcatgttgacaaagagtaaggtttca
tcaagtggagcctcaactgcttcagctgcaccagcaaatccggcccaaccaactacaact
ccaccgcctgtgtcggcacaaccatccacaacatctcagattcctgcaccggctgtggca
atgccacaggctgtacctgaatctacccctgctgtagctcctcctgtctccagttcagga
tcagatgtctatggccaagctgcatcaaatcttgttgcgggaagtaatttagaaactatg
gttcaacagatacttgatatgggtggaggtagttgggacagggaaactgttctcggtgct
ctacgtgctgcgtataacaaccctgaaagagctgttgaatatctgtattctggcattcct
gaacaaactggagttccaccagtttctcgagtccctgctggtgggcagcctgttaatcca
ccagcccaggttcaacaaccagcagctgctgcagctgcaactgtcagtggtcccaatgca
aacccactggatctttttcctcagggccttccaaacatgggttcaaacgccagtgcaggt
accttggatttcttgcgcaacagtcaacagttccaagccttgcgaggtatggtgcaagca
aatccccaaatattgcagcctatgcttcaggagcttggaaagcaaaatccagggcttatg
aggctcatccaagaacatcaggctgacttcttgcgtttgataaatgagcctgttgaagga
ggagaggggaacatactgggtcagctggcctcagcgatgccacaggctgtgactgtgacc
cctcaagagagagaagctattgagcgtcttgaagcaatgggcttcgatcgtgccctagtg
ttggaggtgttctttgcatgtaacaaggatgaggagttggcggccaactatcttttagat
catatgcatgagttcgaggattga
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