Pistacia vera (pistachio): 116142157
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Entry
116142157 CDS
T07386
Name
(RefSeq) histone deacetylase 19
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03082
ATP-dependent chromatin remodeling
pvy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116142157
03083 Polycomb repressive complex
116142157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvy03036
]
116142157
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
116142157
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
116142157
HDAC complexes
Sin3A-HDAC complex
116142157
BRAF-HDAC complex
116142157
REST complex
116142157
SHIP complex
116142157
MiDAC complex
116142157
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
116142157
Heterochromatin formation proteins
Other heterochromatin formation proteins
116142157
Chromatin remodeling factors
NuRD complex
116142157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
116142157
NCBI-ProteinID:
XP_031283452
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MDTGGNSLPSGADGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQYMQ
VLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGMEVDDKMPQHEYYEYFGPDYSLHVAPSNMEN
KNSRQLLEEIRIKLLDYLSKLQHAPSVQFQERPPDTEIPEADEDQDDPDERWDPDSDMEV
DDERKPLPTRVKRETVEPEPKDLEGHKGIAEHARGFDTNADETANTKVLDTSSMQIDEAS
VKVEQENMNKTPDHMYPKS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggacactggaggaaattctttaccctctggggctgatggggttaagagaaaagtgtgt
tatttctatgatccagaggtgggaaattactactatggacagggtcaccctatgaaacca
catcgcattcggatgactcatgcccttcttgcccactatggattgcttcagtatatgcag
gtcctcaagccttttcctgccagagatagggatctttgtcgttttcatgccgacgattac
gtgtcttttctcaggagtattacccctgagacccagcaggatcagctccggcaactcaag
cgctttaatgttggtgaagattgccctgtctttgatggtctttattccttttgtcaaact
tatgctggcggctcggttggtggtgctgtcaagttgaaccacggcctatgcgatattgct
gtcaattgggctggtgggctgcatcacgctaagaaatgtgaagcttctggcttttgctat
gtcaatgatattgtcttggccattttggagcttcttaagcagcatgagcgtgttttatat
gtggatattgatatccatcatggagatggtgtggaggaggcgttttatacaactgatagg
gtcatgaccgtttcattccacaagtttggagactattttcctggtacaggggacatacgt
gatattggttatggaaaaggaaagtactattctcttaatgttccattggatgatgggatt
gatgatgaaagctatcactacttgttcaaaccaataattggaaaagtgatggaagttttt
aggcctggtgctgtggttctccaatgtggtgccgactcattgtctggggatagattagga
tgcttcaatctttcaatcaaaggtcatgcagaatgtgtcagatttatgagatcattcaat
gtgccactattgctgttgggaggtggtggttataccattcgaaatgttgctcgttgctgg
tgctacgagactggagttgcacttggtatggaagttgatgacaagatgcctcaacatgag
tattacgagtattttggtccagactatagccttcatgttgctccgagtaacatggagaat
aagaattcgagacagttacttgaggaaataagaattaagcttcttgattatctctcaaag
cttcagcatgcacccagcgtccagtttcaggaaagaccacctgatactgaaattccagag
gcagatgaagatcaagatgatccagatgagaggtgggatccagattctgacatggaagtt
gatgatgaacgaaaacctctaccaaccagagtaaagagagaaacggttgaacctgagcca
aaagatctggagggccataaaggaattgctgagcatgctagaggctttgatacaaatgct
gatgaaactgctaacacgaaggtattggatacgagttcaatgcaaatcgatgaagcaagt
gtaaaagtagaacaagaaaacatgaacaagacacctgatcacatgtacccgaagtcctga
DBGET
integrated database retrieval system