KEGG   Pistacia vera (pistachio): 116142157
Entry
116142157         CDS       T07386                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03082  ATP-dependent chromatin remodeling
pvy03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116142157
   03083 Polycomb repressive complex
    116142157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvy03036]
    116142157
Enzymes [BR:pvy01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     116142157
Chromosome and associated proteins [BR:pvy03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     116142157
   HDAC complexes
    Sin3A-HDAC complex
     116142157
    BRAF-HDAC complex
     116142157
    REST complex
     116142157
    SHIP complex
     116142157
    MiDAC complex
     116142157
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     116142157
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    116142157
  Chromatin remodeling factors
   NuRD complex
    116142157
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 116142157
NCBI-ProteinID: XP_031283452
LinkDB
Position
Unknown
AA seq 499 aa
MDTGGNSLPSGADGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQYMQ
VLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYHYLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGMEVDDKMPQHEYYEYFGPDYSLHVAPSNMEN
KNSRQLLEEIRIKLLDYLSKLQHAPSVQFQERPPDTEIPEADEDQDDPDERWDPDSDMEV
DDERKPLPTRVKRETVEPEPKDLEGHKGIAEHARGFDTNADETANTKVLDTSSMQIDEAS
VKVEQENMNKTPDHMYPKS
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggacactggaggaaattctttaccctctggggctgatggggttaagagaaaagtgtgt
tatttctatgatccagaggtgggaaattactactatggacagggtcaccctatgaaacca
catcgcattcggatgactcatgcccttcttgcccactatggattgcttcagtatatgcag
gtcctcaagccttttcctgccagagatagggatctttgtcgttttcatgccgacgattac
gtgtcttttctcaggagtattacccctgagacccagcaggatcagctccggcaactcaag
cgctttaatgttggtgaagattgccctgtctttgatggtctttattccttttgtcaaact
tatgctggcggctcggttggtggtgctgtcaagttgaaccacggcctatgcgatattgct
gtcaattgggctggtgggctgcatcacgctaagaaatgtgaagcttctggcttttgctat
gtcaatgatattgtcttggccattttggagcttcttaagcagcatgagcgtgttttatat
gtggatattgatatccatcatggagatggtgtggaggaggcgttttatacaactgatagg
gtcatgaccgtttcattccacaagtttggagactattttcctggtacaggggacatacgt
gatattggttatggaaaaggaaagtactattctcttaatgttccattggatgatgggatt
gatgatgaaagctatcactacttgttcaaaccaataattggaaaagtgatggaagttttt
aggcctggtgctgtggttctccaatgtggtgccgactcattgtctggggatagattagga
tgcttcaatctttcaatcaaaggtcatgcagaatgtgtcagatttatgagatcattcaat
gtgccactattgctgttgggaggtggtggttataccattcgaaatgttgctcgttgctgg
tgctacgagactggagttgcacttggtatggaagttgatgacaagatgcctcaacatgag
tattacgagtattttggtccagactatagccttcatgttgctccgagtaacatggagaat
aagaattcgagacagttacttgaggaaataagaattaagcttcttgattatctctcaaag
cttcagcatgcacccagcgtccagtttcaggaaagaccacctgatactgaaattccagag
gcagatgaagatcaagatgatccagatgagaggtgggatccagattctgacatggaagtt
gatgatgaacgaaaacctctaccaaccagagtaaagagagaaacggttgaacctgagcca
aaagatctggagggccataaaggaattgctgagcatgctagaggctttgatacaaatgct
gatgaaactgctaacacgaaggtattggatacgagttcaatgcaaatcgatgaagcaagt
gtaaaagtagaacaagaaaacatgaacaagacacctgatcacatgtacccgaagtcctga

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