Pectobacterium versatile: OA04_07320
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Entry
OA04_07320 CDS
T07772
Symbol
rafA
Name
(GenBank) alpha-galactosidase
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz00052
Galactose metabolism
pvz00561
Glycerolipid metabolism
pvz00600
Sphingolipid metabolism
pvz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
OA04_07320 (rafA)
09103 Lipid metabolism
00561 Glycerolipid metabolism
OA04_07320 (rafA)
00600 Sphingolipid metabolism
OA04_07320 (rafA)
Enzymes [BR:
pvz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
OA04_07320 (rafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Melibiase
Glyco_hydro_36N
Glyco_hydro_36C
Spb1_C
Melibiase_2
Motif
Other DBs
NCBI-ProteinID:
AVT57375
LinkDB
All DBs
Position
complement(783017..785161)
Genome browser
AA seq
714 aa
AA seq
DB search
MKRDIVQLTSAQCDVIVRCAPAAEILYWGPRLRGFSPEDIVSLQRPVANGRLDVDLPLTL
AMEYGRGQFGSPGIEGHRSGYDAAPIFTTTQTDVQDNTLTITAEDAQAGLRLISELRLDP
QTDVLQLRHTLENLRADAWQVQRLAVTLPVPERASDVMAFHGRWLREFQTHRLTLQHGGF
IQESRRGRSSHEYFPAFILGESAFSEQRGAVWGVHLGWSGNHRLRADIKTDGRRVVQAEA
LYLPGEITLAQSESLTTPWVYAAFSDAGLNGMSQRYHTFLRQSLIQFSGDKPRPVHLNTW
EGIYFDHSPEYIMQMASKAADVGVERFIIDDGWFRGRHHDQAALGDWYLDEEKYPNGLMP
VIEHVKALGMEFGIWVEPEMINPDSDLFRAHPDWVLQLPGYAQPTGRYQYVLNLNQPEAF
AYLLERLSWLLGEHPIDYVKWDMNRELVQPGHEGRLAADAQTRQFYRLLDTLSQRFPDVE
FESCASGGGRIDYGVLERTQRFWVSDNNDALERQTIQRGMSYFFPPEVMGQHIGHARCHA
TYRRHTIAFRGLTALFGHMGIELDPVKADDDELEGYRHYIQLHKTLRPLLHSGTTWRVEM
PDDTVQVTGVVSHDRQHAVFQVAQLRMPAYSLAGTLRFPGLLPNARYEVTLLDSPEIKTV
REGGGTMRELPPWLRQPIVVSGDWLMQAGLALPVLTPETAILVALSPVMKSTGN
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgatattgttcaattaaccagcgcgcagtgcgatgtcatcgtacgctgcgcc
ccggcagcggaaattctctactgggggccacggctgcgcggtttttcgccagaagatatc
gtttctctgcaacgccccgtcgctaacggtcgtctggacgtggatcttcctctgaccctg
gcgatggaatacgggcgtggccagtttggttcaccgggtattgaagggcaccgttcaggc
tatgacgccgcgccgatcttcacgacgacgcagactgacgttcaggacaatacgctcacc
attacggcggaagatgcgcaggcagggcttcgcctgatcagcgaactgcgtctggatccg
cagaccgatgtattgcaactgcgccacacgctagagaatctgcgtgcggatgcctggcaa
gtacagcgcctcgccgtcacgctgcccgtcccagaacgggcgagcgacgtcatggcgttt
catggccgctggctgcgcgagtttcagactcaccgcctcacattgcagcacggcggtttt
attcaggaaagccgtcggggaagaagttcccacgagtatttccccgcctttatactcggc
gagtccgcattcagcgaacagcgtggcgctgtctggggcgtgcatttaggctggagcggc
aaccaccgcctgcgtgccgatatcaaaacggatggccgtcgcgtcgtacaggcggaagcc
ctgtatctgccgggtgaaatcacgctggcgcagtcggaatcgctcacgacgccgtgggtc
tacgccgccttctccgatgccggtttaaacggcatgagccagcgctatcacaccttcttg
cgccagtccctaatccaattctccggcgataagccacgtccggtacatctcaatacgtgg
gaagggatctatttcgatcattcccctgagtacatcatgcagatggcgagcaaagccgcc
gacgtcggtgtagagcgcttcattatcgatgacggctggttccgtgggcgtcaccacgac
caagccgcactcggcgactggtatctggacgaggaaaaataccctaacgggctgatgcca
gtgattgagcatgtcaaagccttggggatggagttcggcatttgggtcgaaccagagatg
atcaatcccgattccgacctgttccgcgcccatccagactgggtgctgcaactgcccggc
tacgcgcagccaacgggccgctaccagtacgtgctgaatttaaaccaacccgaggccttc
gcttatctactggagcggctgagctggctgttgggtgagcaccctatcgattatgtgaag
tgggatatgaatcgcgagctggtacagcccggtcatgaggggcgtctggccgccgatgcg
caaacccgacagttctatcgtctgctcgataccctgagccagcgttttcccgatgtcgag
tttgaatcctgcgcctccggtggcggccgcatcgactacggcgtgctggagcgtacccag
cgtttctgggtgtcggataacaacgacgcattggaacgccagactatccagcgcggcatg
agctacttcttcccaccagaggtgatggggcaacacatcgggcacgcccgctgtcacgcc
acctatcggcgtcacaccatcgcctttcgcgggctgaccgccctgttcggccacatgggc
atcgagttggatcccgtgaaggccgatgacgacgagctggaaggttatcgccactacatc
cagttgcacaaaacactgcgcccgctgctgcacagcggcaccacctggcgggtcgagatg
ccggacgatacggtgcaggtcactggcgtggtaagccacgatcggcagcacgccgttttt
caggtagcccagttgcgtatgccggcttattcgctggcggggacgctccgcttccccggt
ctgctgcccaacgcacgctatgaagtcacactgctggacagcccagaaatcaaaacggtg
cgagaaggcggcggcaccatgcgcgagctcccgccttggttacgtcagccgatcgtggtt
tccggtgattggctgatgcaggccggccttgccctgcctgtcctgacgccagaaaccgcc
attctggtcgcgctttccccggtgatgaagagcacaggcaactaa
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