Pectobacterium wasabiae: A7983_08615
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Entry
A7983_08615 CDS
T04535
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pws
Pectobacterium wasabiae
Pathway
pws03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A7983_08615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pws03400
]
A7983_08615
Enzymes [BR:
pws01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A7983_08615
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A7983_08615
DNA repair and recombination proteins [BR:
pws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A7983_08615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
AOR63320
UniProt:
A0A1D7Z0B4
LinkDB
All DBs
Position
1919698..1920507
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGISPYLVGHAILYAEVRNARLRWPVSAEILSLSDEPVLSVRRRAKYLL
IELTRGWIIVHLGMSGSLRVLPEYAEPEKHDHVDLVMDSGKVLRYTDPRRFGAWLWTDNL
ETCSVLAHLGPEPLEAEFSADYLYQASRGKKTAIKQWIMDNKVVVGVGNIYASESLFAAG
IHPDRTAGSLNENDAAVLVRVIKQVLQLSIEQGGTTLRDFLQSDGKPGYFAQELRVYGRS
GEPCRTCGTPIETAKHGQRSTFFCRRCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcctgaggttgaaaccagtcgtcggggaatttcaccgtatcttgtcggt
cacgccattctttatgcggaagtgaggaacgcgcgcctgcgctggccggtatcggctgag
atcctctcactgagcgatgagccagtgctcagtgtgcgtcggcgggcaaaatatctgctg
attgaactcacgcgtggctggattatcgtgcacctcggtatgtctggcagcctgcgggtg
ttgccagaatatgccgaacctgaaaagcacgatcatgttgatttggtgatggatagcggc
aaggtattgcgttacaccgatccccggcgttttggcgcttggctgtggacggataatcta
gaaacctgctcggtattggcgcatctggggcccgagccgttagaggcggaattctctgca
gattatctctatcaggcgtcacgcggtaaaaaaacagcaatcaagcagtggattatggat
aacaaagtggtggttggcgtaggtaatatttacgcgagtgaatcgctgttcgctgctggc
atccatcctgacagaaccgccggatcgttaaatgaaaacgatgcagccgtattggttcgt
gtgattaagcaggtgttacagctttcgattgagcagggtggtacgacgctgcgtgacttt
ttgcaatcagatggcaagccaggttatttcgcgcaggagttacgggtctatggccgcagc
ggtgaaccttgccggacctgtgggacaccaatagaaaccgcgaaacatgggcagcgtagc
acgttcttttgccgccgttgtcagaagtga
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